Gm18594 Pseudogene Detail

Summary

• Symbol
  Gm18594
• Name
  predicted gene, 18594

• Feature Type
  pseudogene
• IDs
  MGI:5010779
  NCBI Gene: 100417407
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:108969587-108970989 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 53.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  194 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010779	pseudogene	Chr5:108969587-108970989 (+)
129S1/SvImJ	ENSMUSG00200024681	pseudogene	Chr5:102719963-102721365 (+)
A/J	ENSMUSG00195039700	pseudogene	Chr5:102177188-102178590 (+)
AKR/J	ENSMUSG00220052250	pseudogene	Chr5:101728031-101729433 (+)
BALB/cJ	ENSMUSG00180047101	pseudogene	Chr5:102330028-102331430 (+)
C3H/HeJ	ENSMUSG00175048473	pseudogene	Chr5:104381575-104382977 (+)
C57BL/6NJ	ENSMUSG00215039297	pseudogene	Chr5:102372595-102373997 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032503	pseudogene	Chr5:101741143-101742540 (+)
CBA/J	ENSMUSG00210044496	pseudogene	Chr5:103139171-103140573 (+)
DBA/2J	ENSMUSG00185048953	pseudogene	Chr5:106034753-106036155 (+)
FVB/NJ	ENSMUSG00205041941	pseudogene	Chr5:102065796-102067198 (+)
JF1/MsJ	ENSUMUG00000017298	pseudogene	Chr5:109089427-109090829 (+)
LP/J	ENSMUSG00230032479	pseudogene	Chr5:110261012-110262414 (+)
NOD/ShiLtJ	ENSMUSG00190051671	pseudogene	Chr5:102029386-102030788 (+)
NZO/HlLtJ	ENSMUSG00225026486	pseudogene	Chr5:117882883-117884285 (+)
PWK/PhJ	ENSLUMG00010038336	pseudogene	Chr5:101074850-101075813 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005046526	pseudogene	Chr5:104767455-104768857 (+)

Homology

• Gene Tree
  Gm18594
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18594
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000093756 (Evidence)
• NCBI Gene
  100417407

Representative Sequences			Length	Strain/Species
genomic	100417407	NCBI Gene Model | MGI Sequence Detail	1403	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17