Gm18559 Pseudogene Detail

Summary

• Symbol
  Gm18559
• Name
  predicted gene, 18559

• Feature Type
  pseudogene
• IDs
  MGI:5010744
  NCBI Gene: 100417360
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:48589263-48589866 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 31.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010744	pseudogene	Chr7:48589255-48589885 (-)
129S1/SvImJ	ENSMUSG00200033416	pseudogene	Chr7:36215474-36216077 (-)
A/J	ENSMUSG00195050105	pseudogene	Chr7:40219779-40220382 (-)
AKR/J	ENSMUSG00220009357	pseudogene	Chr7:34509623-34510226 (-)
BALB/cJ	ENSMUSG00180044297	pseudogene	Chr7:37103503-37104106 (-)
C3H/HeJ	ENSMUSG00175045064	pseudogene	Chr7:37676953-37677556 (-)
C57BL/6NJ	ENSMUSG00215046204	pseudogene	Chr7:36886482-36887085 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023725	pseudogene	Chr7:40708699-40709286 (-)
CBA/J	ENSMUSG00210049952	pseudogene	Chr7:37988124-37988727 (-)
DBA/2J	ENSMUSG00185028741	pseudogene	Chr7:41886483-41887086 (-)
FVB/NJ	ENSMUSG00205049332	pseudogene	Chr7:37634063-37634666 (-)
JF1/MsJ	ENSUMUG00000055518	pseudogene	Chr7:46636512-46637099 (-)
LP/J	ENSMUSG00230051948	pseudogene	Chr7:47403596-47404199 (-)
NOD/ShiLtJ	ENSMUSG00190051308	pseudogene	Chr7:37974889-37975492 (-)
NZO/HlLtJ	ENSMUSG00225020625	pseudogene	Chr7:45513879-45514482 (-)
PWK/PhJ	ENSLUMG00010050580	pseudogene	Chr7:36747243-36747846 (-)
SPRET/EiJ	ENSMSPG00010046628	pseudogene	Chr7:36585884-36586487 (-)
WSB/EiJ	ENSIUOG00005031479	pseudogene	Chr7:38332452-38333055 (-)

Homology

• Gene Tree
  Gm18559
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000109507 (Evidence)
• NCBI Gene
  100417360

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109507	Ensembl Gene Model | MGI Sequence Detail	604	C57BL/6J
transcript	ENSMUST00000208249	Ensembl | MGI Sequence Detail	604	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;