Gm18556 Pseudogene Detail

Summary

• Symbol
  Gm18556
• Name
  predicted gene, 18556

• Feature Type
  pseudogene
• IDs
  MGI:5010741
  NCBI Gene: 100417356
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:81891942-81892935 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 39.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010741	pseudogene	Chr10:81891942-81893073 (-)
129S1/SvImJ	ENSMUSG00200050789	pseudogene	Chr10:78313681-78314374 (-)
A/J	ENSMUSG00195050612	pseudogene	Chr10:78755017-78756148 (-)
AKR/J	ENSMUSG00220049920	pseudogene	Chr10:78352688-78353819 (-)
BALB/cJ	ENSMUSG00180053433	pseudogene	Chr10:78765419-78766550 (-)
C3H/HeJ	ENSMUSG00175052806	pseudogene	Chr10:78636182-78637313 (-)
C57BL/6NJ	ENSMUSG00215053150	pseudogene	Chr10:78378112-78379243 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052145	pseudogene	Chr10:78127881-78129014 (-)
CBA/J	ENSMUSG00210050284	pseudogene	Chr10:78492202-78493333 (-)
DBA/2J	ENSMUSG00185053991	pseudogene	Chr10:78701749-78702880 (-)
FVB/NJ	ENSMUSG00205052140	pseudogene	Chr10:78419192-78420323 (-)
JF1/MsJ	ENSUMUG00000056053	pseudogene	Chr10:80090996-80092121 (-)
LP/J	ENSMUSG00230018902	pseudogene	Chr10:80604210-80605341 (-)
NOD/ShiLtJ	ENSMUSG00190052687	pseudogene	Chr10:78748272-78749403 (-)
NZO/HlLtJ	ENSMUSG00225053024	pseudogene	Chr10:84890705-84891836 (-)
PWK/PhJ	ENSLUMG00010051825	pseudogene	Chr10:78419213-78420338 (-)
SPRET/EiJ	ENSMSPG00010048287	pseudogene	Chr10:79904445-79905574 (-)
WSB/EiJ	ENSIUOG00005051335	pseudogene	Chr10:78486702-78487833 (-)

Homology

• Gene Tree
  Gm18556
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18556
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112373 (Evidence)
• NCBI Gene
  100417356

Representative Sequences			Length	Strain/Species
genomic	100417356	NCBI Gene Model | MGI Sequence Detail	994	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87