Gm18533 Pseudogene Detail

Summary

• Symbol
  Gm18533
• Name
  predicted gene, 18533

• Feature Type
  pseudogene
• IDs
  MGI:5010718
  NCBI Gene: 100417323
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:19204332-19205930 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 8.23 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  180 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010718	pseudogene	Chr15:19204332-19205930 (+)
129S1/SvImJ	ENSMUSG00200004651	pseudogene	Chr15:16209935-16211523 (+)
A/J	ENSMUSG00195011855	pseudogene	Chr15:16121214-16122818 (+)
AKR/J	ENSMUSG00220001713	pseudogene	Chr15:16034711-16036309 (+)
BALB/cJ	ENSMUSG00180009752	pseudogene	Chr15:16103085-16104689 (+)
C3H/HeJ	ENSMUSG00175002062	pseudogene	Chr15:16262012-16263616 (+)
C57BL/6NJ	ENSMUSG00215008422	pseudogene	Chr15:16146573-16148171 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002619	pseudogene	Chr15:16236534-16238132 (+)
CBA/J	ENSMUSG00210004893	pseudogene	Chr15:16264805-16266409 (+)
DBA/2J	ENSMUSG00185003407	pseudogene	Chr15:16201545-16203149 (+)
FVB/NJ	ENSMUSG00205010741	pseudogene	Chr15:16094458-16096062 (+)
JF1/MsJ	ENSUMUG00000013914	pseudogene	Chr15:16280102-16281703 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190001820	pseudogene	Chr15:16165060-16166658 (+)
NZO/HlLtJ	ENSMUSG00225024310	pseudogene	Chr15:19916627-19918231 (+)
PWK/PhJ	ENSLUMG00010014914	pseudogene	Chr15:16381108-16382709 (+)
SPRET/EiJ	ENSMSPG00010001056	pseudogene	Chr15:16633594-16635193 (+)
WSB/EiJ	ENSIUOG00005012199	pseudogene	Chr15:16196141-16197739 (+)

Homology

• Gene Tree
  Gm18533
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18533
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000115588 (Evidence)
• NCBI Gene
  100417323

Representative Sequences			Length	Strain/Species
genomic	100417323	NCBI Gene Model | MGI Sequence Detail	1599	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6