Gm18521 Pseudogene Detail

Summary

• Symbol
  Gm18521
• Name
  predicted gene, 18521

• Feature Type
  pseudogene
• IDs
  MGI:5010706
  NCBI Gene: 100417309
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:60922762-60923587 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 31.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  218 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010706	pseudogene	Chr17:60922738-60923587 (-)
129S1/SvImJ	ENSMUSG00200016860	pseudogene	Chr17:56217860-56218685 (-)
A/J	ENSMUSG00195007345	pseudogene	Chr17:57598412-57599237 (-)
AKR/J	ENSMUSG00220013651	pseudogene	Chr17:56664778-56665603 (-)
BALB/cJ	ENSMUSG00180006583	pseudogene	Chr17:57342415-57343240 (-)
C3H/HeJ	ENSMUSG00175007688	pseudogene	Chr17:56649948-56650773 (-)
C57BL/6NJ	ENSMUSG00215009206	pseudogene	Chr17:56297275-56298100 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019208	pseudogene	Chr17:57288530-57289349 (-)
CBA/J	ENSMUSG00210029524	pseudogene	Chr17:56447207-56448032 (-)
DBA/2J	ENSMUSG00185009642	pseudogene	Chr17:59298717-59299542 (-)
FVB/NJ	ENSMUSG00205007336	pseudogene	Chr17:56932905-56933730 (-)
JF1/MsJ	ENSUMUG00000034876	pseudogene	Chr17:58977840-58978664 (-)
LP/J	ENSMUSG00230029469	pseudogene	Chr17:60270583-60271408 (-)
NOD/ShiLtJ	ENSMUSG00190010906	pseudogene	Chr17:56431269-56432094 (-)
NZO/HlLtJ	ENSMUSG00225026463	pseudogene	Chr17:62560973-62561798 (-)
PWK/PhJ	ENSLUMG00010009737	pseudogene	Chr17:56236220-56237044 (-)
SPRET/EiJ	ENSMSPG00010006064	pseudogene	Chr17:56574975-56575807 (-)
WSB/EiJ	ENSIUOG00005024386	pseudogene	Chr17:57288614-57289097 (-)

Homology

• Gene Tree
  Gm18521
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117134 (Evidence)
• NCBI Gene
  100417309

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117134	Ensembl Gene Model | MGI Sequence Detail	826	C57BL/6J
transcript	ENSMUST00000233542	Ensembl | MGI Sequence Detail	826	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;