Gm18514 Pseudogene Detail

Summary

• Symbol
  Gm18514
• Name
  predicted gene, 18514

• Feature Type
  pseudogene
• IDs
  MGI:5010699
  NCBI Gene: 100417298
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:62505582-62506017 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 32.45 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010699	pseudogene	Chr10:62505472-62506017 (+)
129S1/SvImJ	ENSMUSG00200029203	pseudogene	Chr10:59178345-59178780 (+)
A/J	ENSMUSG00195028731	pseudogene	Chr10:59485686-59486121 (+)
AKR/J	ENSMUSG00220041882	pseudogene	Chr10:59179031-59179466 (+)
BALB/cJ	ENSMUSG00180027418	pseudogene	Chr10:59528002-59528437 (+)
C3H/HeJ	ENSMUSG00175027109	pseudogene	Chr10:59385560-59385995 (+)
C57BL/6NJ	ENSMUSG00215032821	pseudogene	Chr10:59126108-59126543 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030410	pseudogene	Chr10:59179356-59179791 (+)
CBA/J	ENSMUSG00210038423	pseudogene	Chr10:59263855-59264290 (+)
DBA/2J	ENSMUSG00185043516	pseudogene	Chr10:59605435-59605870 (+)
FVB/NJ	ENSMUSG00205037946	pseudogene	Chr10:59279075-59279510 (+)
JF1/MsJ	ENSUMUG00000023271	pseudogene	Chr10:60846340-60846775 (+)
LP/J	ENSMUSG00230019519	pseudogene	Chr10:61408359-61408794 (+)
NOD/ShiLtJ	ENSMUSG00190039869	pseudogene	Chr10:59591069-59591504 (+)
NZO/HlLtJ	ENSMUSG00225045637	pseudogene	Chr10:65689371-65689806 (+)
PWK/PhJ	ENSLUMG00010024578	pseudogene	Chr10:59233973-59234401 (+)
SPRET/EiJ	ENSMSPG00010023970	pseudogene	Chr10:60788413-60788849 (+)
WSB/EiJ	ENSIUOG00005041500	pseudogene	Chr10:59160456-59160891 (+)

Homology

• Gene Tree
  Gm18514
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18514
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112901 (Evidence)
• NCBI Gene
  100417298

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112901	Ensembl Gene Model | MGI Sequence Detail	436	C57BL/6J
transcript	ENSMUST00000218980	Ensembl | MGI Sequence Detail	436	Not Applicable

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87