Gm18502 Pseudogene Detail

Summary

• Symbol
  Gm18502
• Name
  predicted gene, 18502

• Feature Type
  pseudogene
• IDs
  MGI:5010687
  NCBI Gene: 100417284
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:31080856-31081054 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 13.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010687	pseudogene	Chr12:31080856-31081605 (+)
129S1/SvImJ	ENSMUSG00200016078	pseudogene	Chr12:22885865-22886063 (+)
A/J	ENSMUSG00195022637	pseudogene	Chr12:25571569-25571767 (+)
AKR/J	ENSMUSG00220032989	pseudogene	Chr12:23540067-23540265 (+)
BALB/cJ	ENSMUSG00180028419	pseudogene	Chr12:24570722-24570920 (+)
C3H/HeJ	ENSMUSG00175021821	pseudogene	Chr12:27604131-27604329 (+)
C57BL/6NJ	ENSMUSG00215024364	pseudogene	Chr12:24006555-24006753 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010504	pseudogene	Chr12:24380774-24380972 (+)
CBA/J	ENSMUSG00210008769	pseudogene	Chr12:24093504-24093702 (+)
DBA/2J	ENSMUSG00185015833	pseudogene	Chr12:26119262-26119460 (+)
FVB/NJ	ENSMUSG00205006530	pseudogene	Chr12:24151062-24151260 (+)
JF1/MsJ	ENSUMUG00000010985	pseudogene	Chr12:30313263-30313461 (+)
LP/J	ENSMUSG00230023888	pseudogene	Chr12:33077202-33077400 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225031429	pseudogene	Chr12:35274604-35274802 (+)
PWK/PhJ	ENSLUMG00010011557	pseudogene	Chr12:24550151-24550349 (+)
SPRET/EiJ	ENSMSPG00010005997	pseudogene	Chr12:25028958-25029156 (+)
WSB/EiJ	ENSIUOG00005021454	pseudogene	Chr12:23768845-23769043 (+)

Homology

• Gene Tree
  Gm18502
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000112890 (Evidence)
• NCBI Gene
  100417284

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112890	Ensembl Gene Model | MGI Sequence Detail	199	C57BL/6J
transcript	ENSMUST00000218679	Ensembl | MGI Sequence Detail	199	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;