Gm18495 Pseudogene Detail

Summary

• Symbol
  Gm18495
• Name
  predicted gene, 18495

• Feature Type
  pseudogene
• IDs
  MGI:5010680
  NCBI Gene: 100417271
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:67848143-67848695 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 39.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010680	pseudogene	Chr16:67848143-67848844 (+)
129S1/SvImJ	ENSMUSG00200008733	pseudogene	Chr16:64751084-64751654 (+)
A/J	ENSMUSG00195001608	pseudogene	Chr16:64465699-64466269 (+)
AKR/J	ENSMUSG00220005703	pseudogene	Chr16:64762190-64762760 (+)
BALB/cJ	ENSMUSG00180001721	pseudogene	Chr16:64602143-64602713 (+)
C3H/HeJ	ENSMUSG00175004646	pseudogene	Chr16:64876520-64877090 (+)
C57BL/6NJ	ENSMUSG00215014801	pseudogene	Chr16:64689431-64690001 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012715	pseudogene	Chr16:64694894-64695462 (+)
CBA/J	ENSMUSG00210015323	pseudogene	Chr16:64806410-64806980 (+)
DBA/2J	ENSMUSG00185004554	pseudogene	Chr16:64769798-64770368 (+)
FVB/NJ	ENSMUSG00205011853	pseudogene	Chr16:64442554-64443124 (+)
JF1/MsJ	ENSUMUG00000016693	pseudogene	Chr16:64926042-64926610 (+)
LP/J	ENSMUSG00230007641	pseudogene	Chr16:67328841-67329411 (+)
NOD/ShiLtJ	ENSMUSG00190016711	pseudogene	Chr16:64817422-64817992 (+)
NZO/HlLtJ	ENSMUSG00225036164	pseudogene	Chr16:70563956-70564526 (+)
PWK/PhJ	ENSLUMG00010011974	pseudogene	Chr16:64612663-64613243 (+)
SPRET/EiJ	ENSMSPG00010002099	pseudogene	Chr16:65318186-65318762 (+)
WSB/EiJ	ENSIUOG00005002384	pseudogene	Chr16:64888488-64889058 (+)

Homology

• Gene Tree
  Gm18495
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Genomic Mutations
  1 involving Gm18495
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116711 (Evidence)
• NCBI Gene
  100417271

Representative Sequences			Length	Strain/Species
genomic	100417271	NCBI Gene Model | MGI Sequence Detail	553	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76