Gm18451 Pseudogene Detail

Summary

• Symbol
  Gm18451
• Name
  predicted gene, 18451

• Feature Type
  pseudogene
• IDs
  MGI:5010636
  NCBI Gene: 100417207
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:54727247-54735354 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 29.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  280 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010636	pseudogene	Chr5:54727247-54735413 (+)
129S1/SvImJ	ENSMUSG00200001478	pseudogene	Chr5:50279135-50287236 (+)
A/J	ENSMUSG00195016949	pseudogene	Chr5:49666410-49676260 (+)
AKR/J	ENSMUSG00220000714	pseudogene	Chr5:49743819-49753669 (+)
BALB/cJ	ENSMUSG00180006634	pseudogene	Chr5:49419264-49429120 (+)
C3H/HeJ	ENSMUSG00175001716	pseudogene	Chr5:51454863-51464711 (+)
C57BL/6NJ	ENSMUSG00215001836	pseudogene	Chr5:50222695-50230804 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011600	pseudogene	Chr5:48471484-48479450 (+)
CAST/EiJ	ENSTCUG00005003157	pseudogene	Chr5:49553297-49562814 (+)
CBA/J	ENSMUSG00210024642	pseudogene	Chr5:50406604-50416452 (+)
DBA/2J	ENSMUSG00185000189	pseudogene	Chr5:52276089-52285938 (+)
FVB/NJ	ENSMUSG00205002998	pseudogene	Chr5:49243034-49252892 (+)
JF1/MsJ	ENSUMUG00000001024	pseudogene	Chr5:56891099-56899161 (+)
LP/J	ENSMUSG00230010774	pseudogene	Chr5:56955014-56963119 (+)
NOD/ShiLtJ	ENSMUSG00190000906	pseudogene	Chr5:49343348-49353200 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010001499	pseudogene	Chr5:49519511-49527674 (+)
SPRET/EiJ	ENSMSPG00010004114	pseudogene	Chr5:51043679-51056999 (+)
WSB/EiJ	ENSIUOG00005000067	pseudogene	Chr5:52291291-52301171 (+)

Homology

• Gene Tree
  Gm18451
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm18451
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000106529 (Evidence)
• NCBI Gene
  100417207

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106529	Ensembl Gene Model | MGI Sequence Detail	8108	C57BL/6J
transcript	ENSMUST00000196759	Ensembl | MGI Sequence Detail	1719	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17