Gm18448 Pseudogene Detail

Summary

• Symbol
  Gm18448
• Name
  predicted gene, 18448

• Feature Type
  pseudogene
• IDs
  MGI:5010633
  NCBI Gene: 100417204
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:107880567-107881165 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 50.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010633	pseudogene	Chr1:107880567-107881174 (+)
129S1/SvImJ	ENSMUSG00200000431	pseudogene	Chr1:105160189-105160787 (+)
A/J	ENSMUSG00195007875	pseudogene	Chr1:104664630-104665228 (+)
AKR/J	ENSMUSG00220000253	pseudogene	Chr1:104686056-104686654 (+)
BALB/cJ	ENSMUSG00180000573	pseudogene	Chr1:104950135-104950733 (+)
C3H/HeJ	ENSMUSG00175000568	pseudogene	Chr1:104880648-104881246 (+)
C57BL/6NJ	ENSMUSG00215008023	pseudogene	Chr1:104876054-104876652 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009226	pseudogene	Chr1:100454362-100454955 (+)
CAST/EiJ	ENSTCUG00005002822	pseudogene	Chr1:104189650-104190248 (+)
CBA/J	ENSMUSG00210000251	pseudogene	Chr1:104759969-104760567 (+)
DBA/2J	ENSMUSG00185008717	pseudogene	Chr1:109183509-109184107 (+)
FVB/NJ	ENSMUSG00205008417	pseudogene	Chr1:104109398-104109996 (+)
JF1/MsJ	ENSUMUG00000000160	pseudogene	Chr1:107774562-107775160 (+)
LP/J	ENSMUSG00230000147	pseudogene	Chr1:108446137-108446735 (+)
NOD/ShiLtJ	ENSMUSG00190000557	pseudogene	Chr1:104815919-104816517 (+)
NZO/HlLtJ	ENSMUSG00225000511	pseudogene	Chr1:112354810-112355408 (+)
PWK/PhJ	ENSLUMG00010000236	pseudogene	Chr1:104176302-104176900 (+)
SPRET/EiJ	ENSMSPG00010000567	pseudogene	Chr1:106428387-106428986 (+)
WSB/EiJ	ENSIUOG00005001045	pseudogene	Chr1:104548399-104548997 (+)

Homology

• Gene Tree
  Gm18448
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm18448
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000101477 (Evidence)
• NCBI Gene
  100417204

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101477	Ensembl Gene Model | MGI Sequence Detail	599	C57BL/6J
transcript	ENSMUST00000186286	Ensembl | MGI Sequence Detail	599	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45