Gm18447 Pseudogene Detail

Summary

• Symbol
  Gm18447
• Name
  predicted gene, 18447

• Feature Type
  pseudogene
• IDs
  MGI:5010632
  NCBI Gene: 100417203
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:104239446-104239752 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 49.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010632	pseudogene	Chr1:104239446-104240050 (+)
129S1/SvImJ	ENSMUSG00200000294	pseudogene	Chr1:101506263-101506569 (+)
A/J	ENSMUSG00195000466	pseudogene	Chr1:100986551-100986857 (+)
AKR/J	ENSMUSG00220000286	pseudogene	Chr1:101051445-101051751 (+)
BALB/cJ	ENSMUSG00180005828	pseudogene	Chr1:101273956-101274262 (+)
C3H/HeJ	ENSMUSG00175005573	pseudogene	Chr1:101180068-101180374 (+)
C57BL/6NJ	ENSMUSG00215007162	pseudogene	Chr1:101226280-101226586 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009216	pseudogene	Chr1:97091407-97091713 (+)
CAST/EiJ	ENSTCUG00005000131	pseudogene	Chr1:100575758-100576064 (+)
CBA/J	ENSMUSG00210000092	pseudogene	Chr1:101074030-101074336 (+)
DBA/2J	ENSMUSG00185008799	pseudogene	Chr1:105532575-105532881 (+)
FVB/NJ	ENSMUSG00205000978	pseudogene	Chr1:100374095-100374401 (+)
JF1/MsJ	ENSUMUG00000000156	pseudogene	Chr1:104165051-104165357 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190000525	pseudogene	Chr1:101181864-101182170 (+)
NZO/HlLtJ	ENSMUSG00225000410	pseudogene	Chr1:108678786-108679092 (+)
PWK/PhJ	ENSLUMG00010006430	pseudogene	Chr1:100577344-100577650 (+)
SPRET/EiJ	ENSMSPG00010000552	pseudogene	Chr1:102845752-102846058 (+)
WSB/EiJ	ENSIUOG00005000271	pseudogene	Chr1:100860768-100861074 (+)

Homology

• Gene Tree
  Gm18447
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm18447
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000101297 (Evidence)
• NCBI Gene
  100417203

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101297	Ensembl Gene Model | MGI Sequence Detail	307	C57BL/6J
transcript	ENSMUST00000187501	Ensembl | MGI Sequence Detail	307	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45