Gm18438 Pseudogene Detail

Summary

• Symbol
  Gm18438
• Name
  predicted gene, 18438

• Feature Type
  pseudogene
• IDs
  MGI:5010623
  NCBI Gene: 100417178
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:85431603-85432158 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 39.82 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010623	pseudogene	ChrX:85431546-85432158 (-)
129S1/SvImJ	ENSMUSG00200032800	pseudogene	ChrX:67441950-67442506 (-)
A/J	ENSMUSG00195041990	pseudogene	ChrX:71163231-71163787 (-)
AKR/J	ENSMUSG00220028781	pseudogene	ChrX:66051081-66051637 (-)
BALB/cJ	ENSMUSG00180025465	pseudogene	ChrX:67708732-67709288 (-)
C3H/HeJ	ENSMUSG00175031439	pseudogene	ChrX:71330669-71331225 (-)
C57BL/6NJ	ENSMUSG00215016996	pseudogene	ChrX:67860455-67861010 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039077	pseudogene	ChrX:68925849-68926403 (-)
CBA/J	ENSMUSG00210025691	pseudogene	ChrX:68052993-68053549 (-)
DBA/2J	ENSMUSG00185038237	pseudogene	ChrX:80401869-80402425 (-)
FVB/NJ	ENSMUSG00205019953	pseudogene	ChrX:67345397-67345952 (-)
JF1/MsJ	ENSUMUG00000024402	pseudogene	ChrX:101141344-101141898 (-)
LP/J	ENSMUSG00230010290	pseudogene	ChrX:87048762-87049318 (-)
NOD/ShiLtJ	ENSMUSG00190025497	pseudogene	ChrX:67354416-67354971 (-)
NZO/HlLtJ	ENSMUSG00225045915	pseudogene	ChrX:92177888-92178443 (-)
PWK/PhJ	ENSLUMG00010035423	pseudogene	ChrX:66849427-66849981 (-)
SPRET/EiJ	ENSMSPG00010023615	pseudogene	ChrX:70598102-70598655 (-)
WSB/EiJ	ENSIUOG00005043464	pseudogene	ChrX:67948363-67948918 (-)

Homology

• Gene Tree
  Gm18438
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118598 (Evidence)
• NCBI Gene
  100417178

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118598	Ensembl Gene Model | MGI Sequence Detail	556	C57BL/6J
transcript	ENSMUST00000239280	Ensembl | MGI Sequence Detail	556	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;