Gm18414 Pseudogene Detail

Summary

• Symbol
  Gm18414
• Name
  predicted gene, 18414

• Feature Type
  pseudogene
• IDs
  MGI:5010599
  NCBI Gene: 100417132
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:43222471-43223164 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 23.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010599	pseudogene	Chr8:43222471-43223313 (+)
129S1/SvImJ	ENSMUSG00200008136	pseudogene	Chr8:38324271-38324974 (+)
A/J	ENSMUSG00195006103	pseudogene	Chr8:38817359-38818062 (+)
AKR/J	ENSMUSG00220006262	pseudogene	Chr8:38624259-38624962 (+)
BALB/cJ	ENSMUSG00180003232	pseudogene	Chr8:38361715-38362418 (+)
C3H/HeJ	ENSMUSG00175015186	pseudogene	Chr8:38488421-38489114 (+)
C57BL/6NJ	ENSMUSG00215009399	pseudogene	Chr8:38302835-38303528 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005645	pseudogene	Chr8:38391996-38392699 (+)
CBA/J	ENSMUSG00210012848	pseudogene	Chr8:38382117-38382820 (+)
DBA/2J	ENSMUSG00185006277	pseudogene	Chr8:44229273-44229966 (+)
FVB/NJ	ENSMUSG00205002450	pseudogene	Chr8:37524226-37524929 (+)
JF1/MsJ	ENSUMUG00000016501	pseudogene	Chr8:45956617-45957310 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190015968	pseudogene	Chr8:38403241-38403944 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010013440	pseudogene	Chr8:38186499-38187202 (+)
SPRET/EiJ	ENSMSPG00010004634	pseudogene	Chr8:39057530-39058226 (+)
WSB/EiJ	ENSIUOG00005005839	pseudogene	Chr8:39275093-39275796 (+)

Homology

• Gene Tree
  Gm18414
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000109987 (Evidence)
• NCBI Gene
  100417132

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109987	Ensembl Gene Model | MGI Sequence Detail	694	C57BL/6J
transcript	ENSMUST00000210858	Ensembl | MGI Sequence Detail	694	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;