Gm18403 Pseudogene Detail

Summary

• Symbol
  Gm18403
• Name
  predicted gene, 18403

• Feature Type
  pseudogene
• IDs
  MGI:5010588
  NCBI Gene: 100417112
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:86961666-86962194 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 38.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010588	pseudogene	Chr3:86961665-86962308 (+)
129S1/SvImJ	ENSMUSG00200039691	pseudogene	Chr3:83800967-83801495 (+)
A/J	ENSMUSG00195053290	pseudogene	Chr3:83822581-83823109 (+)
AKR/J	ENSMUSG00220051474	pseudogene	Chr3:83776129-83776657 (+)
BALB/cJ	ENSMUSG00180049670	pseudogene	Chr3:83945720-83946248 (+)
C3H/HeJ	ENSMUSG00175048412	pseudogene	Chr3:83749179-83749707 (+)
C57BL/6NJ	ENSMUSG00215049999	pseudogene	Chr3:84203832-84204360 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010940	pseudogene	Chr3:79837249-79837791 (+)
CAST/EiJ	ENSTCUG00005048791	pseudogene	Chr3:83275694-83276222 (+)
CBA/J	ENSMUSG00210047841	pseudogene	Chr3:83893438-83893966 (+)
DBA/2J	ENSMUSG00185053515	pseudogene	Chr3:84034528-84035056 (+)
FVB/NJ	ENSMUSG00205049648	pseudogene	Chr3:82851763-82852291 (+)
JF1/MsJ	ENSUMUG00000051758	pseudogene	Chr3:83588090-83588618 (+)
LP/J	ENSMUSG00230037140	pseudogene	Chr3:86021327-86021855 (+)
NOD/ShiLtJ	ENSMUSG00190049461	pseudogene	Chr3:84301231-84301759 (+)
NZO/HlLtJ	ENSMUSG00225008101	pseudogene	Chr3:88772634-88773162 (+)
PWK/PhJ	ENSLUMG00010052029	pseudogene	Chr3:83682917-83683444 (+)
SPRET/EiJ	ENSMSPG00010050522	pseudogene	Chr3:84490611-84491139 (+)
WSB/EiJ	ENSIUOG00005050300	pseudogene	Chr3:84278958-84279486 (+)

Homology

• Gene Tree
  Gm18403
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18403
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000103913 (Evidence)
• NCBI Gene
  100417112

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103913	Ensembl Gene Model | MGI Sequence Detail	529	C57BL/6J
transcript	ENSMUST00000192907	Ensembl | MGI Sequence Detail	529	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426