Gm18378 Pseudogene Detail

Summary

• Symbol
  Gm18378
• Name
  predicted gene, 18378

• Feature Type
  pseudogene
• IDs
  MGI:5010563
  NCBI Gene: 100417038
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:91173049-91173670 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 48.23 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010563	pseudogene	Chr9:91173041-91173670 (+)
129S1/SvImJ	ENSMUSG00200005991	pseudogene	Chr9:88285261-88285888 (+)
A/J	ENSMUSG00195007836	pseudogene	Chr9:87553863-87554490 (+)
AKR/J	ENSMUSG00220020247	pseudogene	Chr9:87933453-87934080 (+)
BALB/cJ	ENSMUSG00180007488	pseudogene	Chr9:87880428-87881055 (+)
C3H/HeJ	ENSMUSG00175004897	pseudogene	Chr9:88191875-88192502 (+)
C57BL/6NJ	ENSMUSG00215010290	pseudogene	Chr9:88185027-88185654 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004291	pseudogene	Chr9:88114117-88114744 (+)
CBA/J	ENSMUSG00210006470	pseudogene	Chr9:88053708-88054335 (+)
DBA/2J	ENSMUSG00185002249	pseudogene	Chr9:88227993-88228620 (+)
FVB/NJ	ENSMUSG00205005212	pseudogene	Chr9:88384138-88384765 (+)
JF1/MsJ	ENSUMUG00000033306	pseudogene	Chr9:88011877-88012504 (+)
LP/J	ENSMUSG00230010567	pseudogene	Chr9:88391635-88392262 (+)
NOD/ShiLtJ	ENSMUSG00190012010	pseudogene	Chr9:87850113-87850740 (+)
NZO/HlLtJ	ENSMUSG00225016292	pseudogene	Chr9:88528842-88529469 (+)
PWK/PhJ	ENSLUMG00010002975	pseudogene	Chr9:87941391-87942018 (+)
SPRET/EiJ	ENSMSPG00010002903	pseudogene	Chr9:89624372-89624992 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm18378
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18378
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000111210 (Evidence)
• NCBI Gene
  100417038

Representative Sequences			Length	Strain/Species
genomic	100417038	NCBI Gene Model | MGI Sequence Detail	622	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;