Gm18358 Pseudogene Detail

Summary

• Symbol
  Gm18358
• Name
  predicted gene, 18358

• Feature Type
  pseudogene
• IDs
  MGI:5010543
  NCBI Gene: 100417008
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:84739435-84740444 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  196 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010543	pseudogene	Chr7:84737976-84740444 (+)
129S1/SvImJ	ENSMUSG00200028150	pseudogene	Chr7:71565468-71567566 (+)
A/J	ENSMUSG00195043413	pseudogene	Chr7:76023279-76025376 (+)
AKR/J	ENSMUSG00220042120	pseudogene	Chr7:69559878-69561975 (+)
BALB/cJ	ENSMUSG00180038870	pseudogene	Chr7:72728844-72730941 (+)
C3H/HeJ	ENSMUSG00175038422	pseudogene	Chr7:73458924-73461022 (+)
C57BL/6NJ	ENSMUSG00215033947	pseudogene	Chr7:72573278-72575669 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045765	pseudogene	Chr7:76009032-76011427 (+)
CBA/J	ENSMUSG00210043307	pseudogene	Chr7:73327284-73329382 (+)
DBA/2J	ENSMUSG00185047405	pseudogene	Chr7:77634059-77636157 (+)
FVB/NJ	ENSMUSG00205035869	pseudogene	Chr7:73279730-73281827 (+)
JF1/MsJ	ENSUMUG00000020572	pseudogene	Chr7:82319904-82322299 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190033062	pseudogene	Chr7:73493633-73495730 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010039181	pseudogene	Chr7:71927503-71929600 (+)
SPRET/EiJ	ENSMSPG00010013215	pseudogene	Chr7:72373600-72375687 (+)
WSB/EiJ	ENSIUOG00005034673	pseudogene	Chr7:73821038-73823429 (+)

Homology

• Gene Tree
  Gm18358
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Gm18358
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000092199 (Evidence)
• NCBI Gene
  100417008

Representative Sequences			Length	Strain/Species
genomic	100417008	NCBI Gene Model | MGI Sequence Detail	1010	C57BL/6J

References

• Summaries
  All 28

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67