Gm18306 Pseudogene Detail

Summary

• Symbol
  Gm18306
• Name
  predicted gene, 18306

• Feature Type
  pseudogene
• IDs
  MGI:5010491
  NCBI Gene: 100416896
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:23147013-23147581 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 10.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010491	pseudogene	Chr7:23147004-23147581 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195053521	pseudogene	Chr7:15574005-15574573 (-)
AKR/J	ENSMUSG00220053345	pseudogene	Chr7:28753243-28753811 (+)
BALB/cJ	ENSMUSG00180053713	pseudogene	Chr7:13713141-13713709 (-)
C3H/HeJ	ENSMUSG00175052407	pseudogene	Chr7:14624500-14625084 (-)
C57BL/6NJ	ENSMUSG00215054866	pseudogene	Chr7:13151829-13152397 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053016	pseudogene	Chr7:14651263-14651819 (-)
CBA/J	ENSMUSG00210053521	pseudogene	Chr7:13806386-13806970 (-)
DBA/2J	ENSMUSG00185055856	pseudogene	Chr7:17086277-17086845 (-)
FVB/NJ	ENSMUSG00205052585	pseudogene	Chr7:13947344-13947912 (-)
JF1/MsJ	ENSUMUG00000057433	pseudogene	Chr7:21320604-21321196 (-)
LP/J	ENSMUSG00230053694	pseudogene	Chr7:22297678-22298266 (-)
NOD/ShiLtJ	ENSMUSG00190052335	pseudogene	Chr7:13273197-13273781 (-)
NZO/HlLtJ	ENSMUSG00225027012	pseudogene	Chr7:21028139-21028707 (-)
PWK/PhJ	ENSLUMG00010050727	pseudogene	Chr7:3554724-3555312 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005052942	pseudogene	Chr7:7820035-7820603 (-)

Homology

• Gene Tree
  Gm18306
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000109477 (Evidence)
• NCBI Gene
  100416896

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109477	Ensembl Gene Model | MGI Sequence Detail	569	C57BL/6J
transcript	ENSMUST00000207338	Ensembl | MGI Sequence Detail	569	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;