Gm18226 Pseudogene Detail

Summary

• Symbol
  Gm18226
• Name
  predicted gene, 18226

• Feature Type
  pseudogene
• IDs
  MGI:5010411
  NCBI Gene: 100416748
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:31479031-31479542 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 17.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010411	pseudogene	Chr9:31479022-31479542 (-)
129S1/SvImJ	ENSMUSG00200008757	pseudogene	Chr9:28478055-28478575 (-)
A/J	ENSMUSG00195006481	pseudogene	Chr9:28290072-28290592 (-)
AKR/J	ENSMUSG00220010623	pseudogene	Chr9:28319770-28320290 (-)
BALB/cJ	ENSMUSG00180006817	pseudogene	Chr9:28418519-28419039 (-)
C3H/HeJ	ENSMUSG00175019494	pseudogene	Chr9:28399025-28399545 (-)
C57BL/6NJ	ENSMUSG00215009476	pseudogene	Chr9:28374925-28375445 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019136	pseudogene	Chr9:28377559-28378079 (-)
CBA/J	ENSMUSG00210022149	pseudogene	Chr9:28429322-28429842 (-)
DBA/2J	ENSMUSG00185002656	pseudogene	Chr9:28474372-28474892 (-)
FVB/NJ	ENSMUSG00205004450	pseudogene	Chr9:28773499-28774019 (-)
JF1/MsJ	ENSUMUG00000014841	pseudogene	Chr9:28654551-28655071 (-)
LP/J	ENSMUSG00230005354	pseudogene	Chr9:28908369-28908889 (-)
NOD/ShiLtJ	ENSMUSG00190006383	pseudogene	Chr9:28510737-28511257 (-)
NZO/HlLtJ	ENSMUSG00225015040	pseudogene	Chr9:28887280-28887800 (-)
PWK/PhJ	ENSLUMG00010009306	pseudogene	Chr9:28510575-28511095 (-)
SPRET/EiJ	ENSMSPG00010002220	pseudogene	Chr9:28880170-28880690 (-)
WSB/EiJ	ENSIUOG00005016009	pseudogene	Chr9:27951813-27952333 (-)

Homology

• Gene Tree
  Gm18226
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110952 (Evidence)
• NCBI Gene
  100416748

Representative Sequences			Length	Strain/Species
genomic	100416748	NCBI Gene Model | MGI Sequence Detail	512	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;