Gm18197 Pseudogene Detail

Summary

• Symbol
  Gm18197
• Name
  predicted gene, 18197

• Feature Type
  pseudogene
• IDs
  MGI:5010382
  NCBI Gene: 100416690
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:93496105-93497040 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 51.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  195 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010382	pseudogene	Chr7:93496051-93497061 (-)
129S1/SvImJ	ENSMUSG00200028830	pseudogene	Chr7:80267385-80268395 (-)
A/J	ENSMUSG00195040119	pseudogene	Chr7:84793291-84794301 (-)
AKR/J	ENSMUSG00220044170	pseudogene	Chr7:78251046-78252056 (-)
BALB/cJ	ENSMUSG00180037958	pseudogene	Chr7:81461601-81462611 (-)
C3H/HeJ	ENSMUSG00175025005	pseudogene	Chr7:82151681-82152694 (-)
C57BL/6NJ	ENSMUSG00215038297	pseudogene	Chr7:81336105-81337115 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035085	pseudogene	Chr7:84720951-84721958 (-)
CBA/J	ENSMUSG00210025964	pseudogene	Chr7:81993377-81994390 (-)
DBA/2J	ENSMUSG00185034673	pseudogene	Chr7:86324544-86325557 (-)
FVB/NJ	ENSMUSG00205041937	pseudogene	Chr7:81976732-81977742 (-)
JF1/MsJ	ENSUMUG00000052355	pseudogene	Chr7:91263509-91264532 (-)
LP/J	ENSMUSG00230045574	pseudogene	Chr7:92412214-92413227 (-)
NOD/ShiLtJ	ENSMUSG00190022311	pseudogene	Chr7:82218402-82219412 (-)
NZO/HlLtJ	ENSMUSG00225011961	pseudogene	Chr7:90687336-90688349 (-)
PWK/PhJ	ENSLUMG00010041624	pseudogene	Chr7:80462569-80463582 (-)
SPRET/EiJ	ENSMSPG00010013466	pseudogene	Chr7:81609392-81610377 (-)
WSB/EiJ	ENSIUOG00005010807	pseudogene	Chr7:82626896-82627906 (-)

Homology

• Gene Tree
  Gm18197
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18197
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118493 (Evidence)
• NCBI Gene
  100416690

Representative Sequences			Length	Strain/Species
genomic	100416690	NCBI Gene Model | MGI Sequence Detail	936	C57BL/6J

References

• Summaries
  All 12

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67