Gm18190 Pseudogene Detail

Summary

• Symbol
  Gm18190
• Name
  predicted gene, 18190

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5010375
  NCBI Gene: 100416683
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:7268500-7269080 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 4.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010375	pseudogene	Chr7:7268497-7281266 (-)
129S1/SvImJ	ENSMUSG00200041526	pseudogene	Chr7:4153954-4166769 (+)
A/J	no annotation
AKR/J	ENSMUSG00220029139	pseudogene	Chr7:1630342-1637102 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175050040	pseudogene	Chr7:5093277-5106046 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029750	pseudogene	Chr7:4138824-4151661 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185047384	pseudogene	Chr7:4141436-4154205 (-)
FVB/NJ	ENSMUSG00205048071	pseudogene	Chr7:3744183-3750950 (-)
JF1/MsJ	ENSUMUG00000054990	pseudogene	Chr7:5752994-5756948 (-)
JF1/MsJ	ENSUMUG00000054946	pseudogene	Chr7:4211021-4223586 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190050700	pseudogene	Chr7:3998825-4011553 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010049977	pseudogene	Chr7:7678390-7691162 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000098900 (Evidence), ENSMUSG00000121470 (Evidence)
• NCBI Gene
  100416683

Representative Sequences			Length	Strain/Species
genomic	100416683	NCBI Gene Model | MGI Sequence Detail	581	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;