Gm18150 Pseudogene Detail

Summary

• Symbol
  Gm18150
• Name
  predicted gene, 18150

• Feature Type
  pseudogene
• IDs
  MGI:5010335
  NCBI Gene: 100416531
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:37147109-37147684 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 19.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010335	pseudogene	Chr18:37146901-37147687 (+)
129S1/SvImJ	ENSMUSG00200045500	pseudogene	Chr18:34152716-34153502 (+)
A/J	ENSMUSG00195037688	pseudogene	Chr18:34305704-34306490 (+)
AKR/J	ENSMUSG00220017225	pseudogene	Chr18:34295860-34296646 (+)
BALB/cJ	ENSMUSG00180022377	pseudogene	Chr18:34755354-34756140 (+)
C3H/HeJ	ENSMUSG00175040910	pseudogene	Chr18:34277355-34278141 (+)
C57BL/6NJ	ENSMUSG00215029540	pseudogene	Chr18:34016381-34017167 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037225	pseudogene	Chr18:34278086-34278868 (+)
CAST/EiJ	ENSTCUG00005025675	pseudogene	Chr18:33913847-33914633 (+)
CBA/J	ENSMUSG00210021490	pseudogene	Chr18:34297363-34298149 (+)
DBA/2J	ENSMUSG00185020470	pseudogene	Chr18:34231980-34232766 (+)
FVB/NJ	ENSMUSG00205036098	pseudogene	Chr18:33957657-33958443 (+)
JF1/MsJ	ENSUMUG00000046626	pseudogene	Chr18:34378977-34379762 (+)
LP/J	ENSMUSG00230048736	pseudogene	Chr18:36349404-36350190 (+)
NOD/ShiLtJ	ENSMUSG00190024097	pseudogene	Chr18:34025677-34026463 (+)
NZO/HlLtJ	ENSMUSG00225047446	pseudogene	Chr18:36247482-36248268 (+)
PWK/PhJ	ENSLUMG00010013812	pseudogene	Chr18:34541567-34542353 (+)
SPRET/EiJ	ENSMSPG00010024352	pseudogene	Chr18:34590927-34591712 (+)
WSB/EiJ	ENSIUOG00005008531	pseudogene	Chr18:34011154-34011939 (+)

Homology

• Gene Tree
  Gm18150
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm18150
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000103601 (Evidence)
• NCBI Gene
  100416531

Representative Sequences			Length	Strain/Species
genomic	100416531	NCBI Gene Model | MGI Sequence Detail	576	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
• Latest
  J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)