Gm18143 Pseudogene Detail

Summary

• Symbol
  Gm18143
• Name
  predicted gene, 18143

• Feature Type
  pseudogene
• IDs
  MGI:5010328
  NCBI Gene: 100416522
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:122750851-122751241 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 65.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010328	pseudogene	Chr14:122749844-122751280 (-)
129S1/SvImJ	ENSMUSG00200024886	pseudogene	Chr14:111672484-111672874 (-)
A/J	ENSMUSG00195032703	pseudogene	Chr14:111402576-111402966 (-)
AKR/J	ENSMUSG00220007939	pseudogene	Chr14:111218054-111218444 (-)
BALB/cJ	ENSMUSG00180028754	pseudogene	Chr14:110894375-110894765 (-)
C3H/HeJ	ENSMUSG00175002005	pseudogene	Chr14:112813153-112813543 (-)
C57BL/6NJ	ENSMUSG00215023349	pseudogene	Chr14:111018950-111019340 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007277	pseudogene	Chr14:112420954-112421344 (-)
CBA/J	ENSMUSG00210027540	pseudogene	Chr14:111779450-111779840 (-)
DBA/2J	ENSMUSG00185014099	pseudogene	Chr14:116919971-116920361 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000032468	pseudogene	Chr14:127925609-127925999 (-)
LP/J	ENSMUSG00230012752	pseudogene	Chr14:128891328-128891718 (-)
NOD/ShiLtJ	ENSMUSG00190025687	pseudogene	Chr14:111620057-111620447 (-)
NZO/HlLtJ	ENSMUSG00225029371	pseudogene	Chr14:118975283-118975673 (-)
PWK/PhJ	ENSLUMG00010031064	pseudogene	Chr14:110865229-110865619 (-)
SPRET/EiJ	ENSMSPG00010014703	pseudogene	Chr14:115145487-115145877 (-)
WSB/EiJ	ENSIUOG00005032087	pseudogene	Chr14:110805974-110806364 (-)

Homology

• Gene Tree
  Gm18143
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000115652 (Evidence)
• NCBI Gene
  100416522

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115652	Ensembl Gene Model | MGI Sequence Detail	391	C57BL/6J
transcript	ENSMUST00000228120	Ensembl | MGI Sequence Detail	391	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;