Gm18135 Pseudogene Detail

Summary

• Symbol
  Gm18135
• Name
  predicted gene, 18135

• Feature Type
  pseudogene
• IDs
  MGI:5010320
  NCBI Gene: 100416507
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:115907472-115907989 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 64.75 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  212 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010320	pseudogene	Chr13:115907472-115908004 (+)
129S1/SvImJ	ENSMUSG00200033058	pseudogene	Chr13:110393378-110393910 (+)
A/J	ENSMUSG00195013542	pseudogene	Chr13:110865136-110865663 (+)
AKR/J	ENSMUSG00220032278	pseudogene	Chr13:109327550-109328082 (+)
BALB/cJ	ENSMUSG00180011033	pseudogene	Chr13:111479331-111479863 (+)
C3H/HeJ	ENSMUSG00175002361	pseudogene	Chr13:111556658-111557190 (+)
C57BL/6NJ	ENSMUSG00215000853	pseudogene	Chr13:111569922-111570454 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026560	pseudogene	Chr13:110629310-110629837 (+)
CBA/J	ENSMUSG00210017289	pseudogene	Chr13:110904570-110905102 (+)
DBA/2J	ENSMUSG00185029840	pseudogene	Chr13:114663738-114664270 (+)
FVB/NJ	ENSMUSG00205007695	pseudogene	Chr13:110313504-110314036 (+)
JF1/MsJ	ENSUMUG00000019224	pseudogene	Chr13:114094106-114094633 (+)
LP/J	ENSMUSG00230012016	pseudogene	Chr13:124862167-124862699 (+)
NOD/ShiLtJ	ENSMUSG00190009639	pseudogene	Chr13:111177199-111177731 (+)
NZO/HlLtJ	ENSMUSG00225031190	pseudogene	Chr13:117013188-117013720 (+)
PWK/PhJ	ENSLUMG00010010803	pseudogene	Chr13:110172391-110172918 (+)
SPRET/EiJ	ENSMSPG00010007011	pseudogene	Chr13:111970520-111971048 (+)
WSB/EiJ	ENSIUOG00005009864	pseudogene	Chr13:110347473-110348005 (+)

Homology

• Gene Tree
  Gm18135
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114324 (Evidence)
• NCBI Gene
  100416507

Representative Sequences			Length	Strain/Species
genomic	100416507	NCBI Gene Model | MGI Sequence Detail	518	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;