Rpl17-ps6 Pseudogene Detail

Summary

• Symbol
  Rpl17-ps6
• Name
  ribosomal protein L17, pseudogene 6
• Synonyms
  Gm18130

• Feature Type
  pseudogene
• IDs
  MGI:5010315
  NCBI Gene: 100416501
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:48916564-48917086 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 24.94 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010315	pseudogene	Chr13:48916526-48917086 (-)
129S1/SvImJ	ENSMUSG00200036753	pseudogene	Chr13:46194955-46195486 (-)
A/J	ENSMUSG00195029641	pseudogene	Chr13:45244531-45245062 (-)
AKR/J	ENSMUSG00220009675	pseudogene	Chr13:45055444-45055975 (-)
BALB/cJ	ENSMUSG00180009060	pseudogene	Chr13:45546817-45547348 (-)
C3H/HeJ	ENSMUSG00175031974	pseudogene	Chr13:45517286-45517817 (-)
C57BL/6NJ	ENSMUSG00215007196	pseudogene	Chr13:45663849-45664380 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033749	pseudogene	Chr13:45576354-45576885 (-)
CBA/J	ENSMUSG00210028207	pseudogene	Chr13:45522646-45523177 (-)
DBA/2J	ENSMUSG00185033708	pseudogene	Chr13:46336700-46337231 (-)
FVB/NJ	ENSMUSG00205013767	pseudogene	Chr13:45299626-45300157 (-)
JF1/MsJ	ENSUMUG00000017408	pseudogene	Chr13:45865504-45866035 (-)
LP/J	ENSMUSG00230030131	pseudogene	Chr13:55657512-55658043 (-)
NOD/ShiLtJ	ENSMUSG00190012499	pseudogene	Chr13:45741556-45742087 (-)
NZO/HlLtJ	ENSMUSG00225036169	pseudogene	Chr13:49407898-49408429 (-)
PWK/PhJ	ENSLUMG00010020992	pseudogene	Chr13:44720650-44721181 (-)
SPRET/EiJ	ENSMSPG00010031026	pseudogene	Chr13:44848949-44849480 (-)
WSB/EiJ	ENSIUOG00005028306	pseudogene	Chr13:44878670-44879201 (-)

Homology

• Gene Tree
  Rpl17-ps6
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Rpl17-ps6
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113297 (Evidence)
• NCBI Gene
  100416501

Representative Sequences			Length	Strain/Species
genomic	100416501	NCBI Gene Model | MGI Sequence Detail	523	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69