Gm18123 Pseudogene Detail

Summary

• Symbol
  Gm18123
• Name
  predicted gene, 18123

• Feature Type
  pseudogene
• IDs
  MGI:5010308
  NCBI Gene: 100416460
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:11127231-11128052 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 7.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010308	pseudogene	Chr7:11127221-11128061 (-)
129S1/SvImJ	ENSMUSG00200041495	pseudogene	Chr7:5260709-5261530 (-)
A/J	ENSMUSG00195052437	pseudogene	Chr7:5003128-5003949 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180051883	pseudogene	Chr7:4961939-4962760 (-)
C3H/HeJ	ENSMUSG00175051436	pseudogene	Chr7:5288610-5289430 (-)
C3H/HeJ	ENSMUSG00175051278	pseudogene	Chr7:5196025-5196845 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030340	pseudogene	Chr7:4968527-4969349 (+)
CAST/EiJ	ENSTCUG00005030348	pseudogene	Chr7:5147703-5148526 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185049590	pseudogene	Chr7:8000565-8001386 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000053259	pseudogene	Chr7:7752316-7753137 (-)
LP/J	ENSMUSG00230048273	pseudogene	Chr7:12182937-12183758 (-)
NOD/ShiLtJ	ENSMUSG00190052425	pseudogene	Chr7:5161553-5162374 (-)
NZO/HlLtJ	ENSMUSG00225022099	pseudogene	Chr7:9786528-9787349 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010050487	pseudogene	Chr7:5036296-5037081 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm18123
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000110005 (Evidence)
• NCBI Gene
  100416460

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110005	Ensembl Gene Model | MGI Sequence Detail	822	C57BL/6J
transcript	ENSMUST00000210874	Ensembl | MGI Sequence Detail	822	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;