Gm18120 Pseudogene Detail

Summary

• Symbol
  Gm18120
• Name
  predicted gene, 18120

• Feature Type
  pseudogene
• IDs
  MGI:5010305
  NCBI Gene: 100416457
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:50634280-50634790 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 24.87 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010305	pseudogene	Chr10:50634278-50634791 (+)
129S1/SvImJ	ENSMUSG00200008081	pseudogene	Chr10:47523290-47523800 (+)
A/J	ENSMUSG00195002954	pseudogene	Chr10:47797859-47798369 (+)
AKR/J	ENSMUSG00220006924	pseudogene	Chr10:47477941-47478451 (+)
BALB/cJ	ENSMUSG00180012642	pseudogene	Chr10:47927601-47928111 (+)
C3H/HeJ	ENSMUSG00175010276	pseudogene	Chr10:47668872-47669382 (+)
C57BL/6NJ	ENSMUSG00215002356	pseudogene	Chr10:47427667-47428177 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009026	pseudogene	Chr10:47653357-47653876 (+)
CBA/J	ENSMUSG00210008603	pseudogene	Chr10:47572034-47572544 (+)
DBA/2J	ENSMUSG00185003488	pseudogene	Chr10:47728214-47728724 (+)
FVB/NJ	ENSMUSG00205005423	pseudogene	Chr10:47623477-47623987 (+)
JF1/MsJ	ENSUMUG00000031500	pseudogene	Chr10:47429131-47429650 (+)
LP/J	ENSMUSG00230006598	pseudogene	Chr10:49529852-49530362 (+)
NOD/ShiLtJ	ENSMUSG00190005846	pseudogene	Chr10:47881450-47881960 (+)
NZO/HlLtJ	ENSMUSG00225022959	pseudogene	Chr10:53810771-53811281 (+)
PWK/PhJ	ENSLUMG00010005007	pseudogene	Chr10:47568086-47568605 (+)
SPRET/EiJ	ENSMSPG00010013787	pseudogene	Chr10:48733547-48734065 (+)
WSB/EiJ	ENSIUOG00005015366	pseudogene	Chr10:47476166-47476676 (+)

Homology

• Gene Tree
  Gm18120
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18120
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112918 (Evidence)
• NCBI Gene
  100416457

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112918	Ensembl Gene Model | MGI Sequence Detail	511	C57BL/6J
transcript	ENSMUST00000220079	Ensembl | MGI Sequence Detail	511	Not Applicable

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87