Gm18077 Pseudogene Detail

Summary

• Symbol
  Gm18077
• Name
  predicted gene, 18077

• Feature Type
  pseudogene
• IDs
  MGI:5010262
  NCBI Gene: 100416371
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:9815938-9816426 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 6.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  186 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010262	pseudogene	Chr14:9815935-9816468 (-)
129S1/SvImJ	ENSMUSG00200026149	pseudogene	Chr14:6497377-6497865 (-)
A/J	ENSMUSG00195032448	pseudogene	Chr14:7303977-7304465 (-)
AKR/J	ENSMUSG00220023918	pseudogene	Chr14:6463215-6463703 (-)
BALB/cJ	ENSMUSG00180025754	pseudogene	Chr14:6611859-6612347 (-)
C3H/HeJ	ENSMUSG00175009783	pseudogene	Chr14:6641602-6642090 (-)
C57BL/6NJ	ENSMUSG00215023423	pseudogene	Chr14:6859226-6859714 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031768	pseudogene	Chr14:6539724-6540212 (-)
CBA/J	ENSMUSG00210037261	pseudogene	Chr14:6863883-6864371 (-)
DBA/2J	ENSMUSG00185038028	pseudogene	Chr14:6869799-6870287 (-)
FVB/NJ	ENSMUSG00205027849	pseudogene	Chr14:6823527-6824015 (-)
JF1/MsJ	ENSUMUG00000025975	pseudogene	Chr14:6875332-6875820 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190034935	pseudogene	Chr14:6855127-6855615 (-)
NZO/HlLtJ	ENSMUSG00225037382	pseudogene	Chr14:7260459-7260947 (-)
PWK/PhJ	ENSLUMG00010034960	pseudogene	Chr14:28181862-28182350 (-)
SPRET/EiJ	ENSMSPG00010002557	pseudogene	Chr14:7176567-7177055 (-)
WSB/EiJ	ENSIUOG00005025524	pseudogene	Chr14:6697062-6697550 (-)

Homology

• Gene Tree
  Gm18077
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000114312 (Evidence)
• NCBI Gene
  100416371

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114312	Ensembl Gene Model | MGI Sequence Detail	489	C57BL/6J
transcript	ENSMUST00000224775	Ensembl | MGI Sequence Detail	489	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;