Gm18072 Pseudogene Detail

Summary

• Symbol
  Gm18072
• Name
  predicted gene, 18072

• Feature Type
  pseudogene
• IDs
  MGI:5010257
  NCBI Gene: 100416364
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:30105763-30106311 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 18.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010257	pseudogene	Chr14:30105760-30106311 (-)
129S1/SvImJ	ENSMUSG00200038828	pseudogene	Chr14:21927486-21928037 (-)
A/J	ENSMUSG00195015046	pseudogene	Chr14:22997540-22998091 (-)
AKR/J	ENSMUSG00220037309	pseudogene	Chr14:22112072-22112623 (-)
BALB/cJ	ENSMUSG00180030793	pseudogene	Chr14:22086145-22086696 (-)
C3H/HeJ	ENSMUSG00175043928	pseudogene	Chr14:22153465-22154016 (-)
C57BL/6NJ	ENSMUSG00215034356	pseudogene	Chr14:22397219-22397770 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025022	pseudogene	Chr14:22233821-22234372 (-)
CBA/J	ENSMUSG00210045178	pseudogene	Chr14:22396432-22396983 (-)
DBA/2J	ENSMUSG00185043402	pseudogene	Chr14:26671235-26671786 (-)
FVB/NJ	ENSMUSG00205037142	pseudogene	Chr14:22255462-22256013 (-)
JF1/MsJ	ENSUMUG00000051278	pseudogene	Chr14:33927291-33927842 (-)
LP/J	ENSMUSG00230038119	pseudogene	Chr14:33951513-33952064 (-)
NOD/ShiLtJ	ENSMUSG00190020174	pseudogene	Chr14:22410027-22410578 (-)
NZO/HlLtJ	ENSMUSG00225038110	pseudogene	Chr14:28284718-28285269 (-)
PWK/PhJ	ENSLUMG00010022714	pseudogene	Chr14:10520886-10521437 (-)
SPRET/EiJ	ENSMSPG00010043289	pseudogene	Chr14:24060018-24060569 (-)
WSB/EiJ	ENSIUOG00005013035	pseudogene	Chr14:22221938-22222489 (-)

Homology

• Gene Tree
  Gm18072
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114670 (Evidence)
• NCBI Gene
  100416364

Representative Sequences			Length	Strain/Species
genomic	100416364	NCBI Gene Model | MGI Sequence Detail	549	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;