Gm18065 Pseudogene Detail

Summary

• Symbol
  Gm18065
• Name
  predicted gene, 18065

• Feature Type
  pseudogene
• IDs
  MGI:5010250
  NCBI Gene: 100416354
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:19168100-19168625 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 6.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010250	pseudogene	Chr13:19168022-19168625 (+)
129S1/SvImJ	ENSMUSG00200014831	pseudogene	Chr13:16399690-16400214 (+)
A/J	ENSMUSG00195040701	pseudogene	Chr13:15528499-15529023 (+)
AKR/J	ENSMUSG00220036613	pseudogene	Chr13:15446931-15447454 (+)
BALB/cJ	ENSMUSG00180039729	pseudogene	Chr13:15889160-15889685 (+)
C3H/HeJ	ENSMUSG00175037618	pseudogene	Chr13:15988033-15988558 (+)
C57BL/6NJ	ENSMUSG00215035198	pseudogene	Chr13:15924460-15924985 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014889	pseudogene	Chr13:16005938-16006462 (+)
CBA/J	ENSMUSG00210031126	pseudogene	Chr13:15842623-15843148 (+)
DBA/2J	ENSMUSG00185014530	pseudogene	Chr13:16543990-16544516 (+)
FVB/NJ	ENSMUSG00205052742	pseudogene	Chr13:15685630-15686154 (+)
JF1/MsJ	ENSUMUG00000023858	pseudogene	Chr13:16267640-16268162 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190023785	pseudogene	Chr13:15816504-15817029 (+)
NZO/HlLtJ	ENSMUSG00225032406	pseudogene	Chr13:19687443-19687969 (+)
PWK/PhJ	ENSLUMG00010031334	pseudogene	Chr13:15275440-15275962 (+)
SPRET/EiJ	ENSMSPG00010021422	pseudogene	Chr13:14877097-14877621 (+)
WSB/EiJ	ENSIUOG00005037552	pseudogene	Chr13:15144194-15144726 (+)

Homology

• Gene Tree
  Gm18065
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000113028 (Evidence)
• NCBI Gene
  100416354

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113028	Ensembl Gene Model | MGI Sequence Detail	526	C57BL/6J
transcript	ENSMUST00000221395	Ensembl | MGI Sequence Detail	526	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;