Phf20-ps Pseudogene Detail

Summary

• Symbol
  Phf20-ps
• Name
  PHD finger protein 20, pseudogene
• Synonyms
  Gm18048

• Feature Type
  pseudogene
• IDs
  MGI:5010233
  NCBI Gene: 100416335
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:14038705-14041590 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 8.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  294 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010233	pseudogene	Chr7:14038623-14041788 (+)
129S1/SvImJ	ENSMUSG00200041765	pseudogene	Chr7:8124258-8127143 (+)
A/J	ENSMUSG00195053222	pseudogene	Chr7:7774644-7777529 (+)
AKR/J	ENSMUSG00220027226	pseudogene	Chr7:7154149-7157034 (+)
BALB/cJ	ENSMUSG00180051336	pseudogene	Chr7:7705704-7708589 (+)
C3H/HeJ	ENSMUSG00175051313	pseudogene	Chr7:8170038-8172923 (+)
C57BL/6NJ	ENSMUSG00215045937	pseudogene	Chr7:8393904-8396789 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010679	pseudogene	Chr2:148176268-148256774 (+)
CAST/EiJ	ENSTCUG00005029994	pseudogene	Chr7:7646603-7650882 (+)
CBA/J	ENSMUSG00210048651	pseudogene	Chr7:7421079-7423964 (+)
DBA/2J	ENSMUSG00185055276	pseudogene	Chr7:10953806-10956691 (+)
FVB/NJ	ENSMUSG00205048652	pseudogene	Chr7:7991878-7994785 (+)
JF1/MsJ	ENSUMUG00000038918	pseudogene	Chr7:10452953-10457229 (+)
LP/J	ENSMUSG00230047712	pseudogene	Chr7:15136163-15139048 (+)
NOD/ShiLtJ	ENSMUSG00190052552	pseudogene	Chr7:12026569-12029476 (+)
NZO/HlLtJ	ENSMUSG00225054309	pseudogene	Chr7:12597081-12599966 (+)
PWK/PhJ	ENSLUMG00010051112	pseudogene	Chr7:11626596-11630872 (+)
SPRET/EiJ	ENSMSPG00010050370	pseudogene	Chr7:7804593-7805012 (+)
WSB/EiJ	ENSIUOG00005053729	pseudogene	Chr7:17159790-17162696 (-)

Homology

• Gene Tree
  Phf20-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098506 (Evidence)
• NCBI Gene
  100416335

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098506	Ensembl Gene Model | MGI Sequence Detail	2886	C57BL/6J
transcript	ENSMUST00000185066	Ensembl | MGI Sequence Detail	2886	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;