Gm18039 Pseudogene Detail

Summary

• Symbol
  Gm18039
• Name
  predicted gene, 18039

• Feature Type
  pseudogene
• IDs
  MGI:5010224
  NCBI Gene: 100416323
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:16661482-16662117 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 6.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010224	pseudogene	Chr10:16661482-16662209 (-)
129S1/SvImJ	ENSMUSG00200010657	pseudogene	Chr10:13650921-13651648 (-)
A/J	ENSMUSG00195006831	pseudogene	Chr10:13637820-13638547 (-)
AKR/J	ENSMUSG00220010227	pseudogene	Chr10:13580150-13580877 (-)
BALB/cJ	ENSMUSG00180016020	pseudogene	Chr10:13768817-13769544 (-)
C3H/HeJ	ENSMUSG00175020949	pseudogene	Chr10:13785672-13786399 (-)
C57BL/6NJ	ENSMUSG00215003993	pseudogene	Chr10:13612313-13613040 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031822	pseudogene	Chr10:13573768-13574495 (-)
CBA/J	ENSMUSG00210015879	pseudogene	Chr10:13723842-13724569 (-)
DBA/2J	ENSMUSG00185007571	pseudogene	Chr10:13710885-13711612 (-)
FVB/NJ	ENSMUSG00205018440	pseudogene	Chr10:13640240-13640967 (-)
JF1/MsJ	ENSUMUG00000014002	pseudogene	Chr10:13797737-13798464 (-)
LP/J	ENSMUSG00230018773	pseudogene	Chr10:15367458-15368185 (-)
NOD/ShiLtJ	ENSMUSG00190011189	pseudogene	Chr10:13718798-13719525 (-)
NZO/HlLtJ	ENSMUSG00225016149	pseudogene	Chr10:19869879-19870606 (-)
PWK/PhJ	ENSLUMG00010015556	pseudogene	Chr10:13521507-13522234 (-)
SPRET/EiJ	ENSMSPG00010011512	pseudogene	Chr10:14058183-14058909 (-)
WSB/EiJ	ENSIUOG00005023017	pseudogene	Chr10:13328885-13329612 (-)

Homology

• Gene Tree
  Gm18039
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112118 (Evidence)
• NCBI Gene
  100416323

Representative Sequences			Length	Strain/Species
genomic	100416323	NCBI Gene Model | MGI Sequence Detail	636	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;