Gm18025 Pseudogene Detail

Summary

• Symbol
  Gm18025
• Name
  predicted gene, 18025

• Feature Type
  pseudogene
• IDs
  MGI:5010210
  NCBI Gene: 100416307
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:34340273-34341134 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 15.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010210	pseudogene	Chr12:34340236-34341157 (-)
129S1/SvImJ	ENSMUSG00200016063	pseudogene	Chr12:26152031-26152892 (-)
A/J	ENSMUSG00195023487	pseudogene	Chr12:28839786-28840647 (-)
AKR/J	ENSMUSG00220034754	pseudogene	Chr12:26811946-26812807 (-)
BALB/cJ	ENSMUSG00180028952	pseudogene	Chr12:27838808-27839669 (-)
C3H/HeJ	ENSMUSG00175022622	pseudogene	Chr12:30872044-30872905 (-)
C57BL/6NJ	ENSMUSG00215023310	pseudogene	Chr12:27269343-27270204 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010933	pseudogene	Chr12:27668602-27669463 (-)
CBA/J	ENSMUSG00210008960	pseudogene	Chr12:27361256-27362117 (-)
DBA/2J	ENSMUSG00185015721	pseudogene	Chr12:29383262-29384123 (-)
FVB/NJ	ENSMUSG00205006703	pseudogene	Chr12:27430693-27431554 (-)
JF1/MsJ	ENSUMUG00000011975	pseudogene	Chr12:33604211-33605072 (-)
LP/J	ENSMUSG00230024251	pseudogene	Chr12:36329779-36330640 (-)
NOD/ShiLtJ	ENSMUSG00190019442	pseudogene	Chr12:26317359-26318220 (-)
NZO/HlLtJ	ENSMUSG00225031679	pseudogene	Chr12:38548279-38549140 (-)
PWK/PhJ	ENSLUMG00010011893	pseudogene	Chr12:27801843-27802704 (-)
SPRET/EiJ	ENSMSPG00010006211	pseudogene	Chr12:28475441-28476295 (-)
WSB/EiJ	ENSIUOG00005022671	pseudogene	Chr12:27053909-27054770 (-)

Homology

• Gene Tree
  Gm18025
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113756 (Evidence)
• NCBI Gene
  100416307

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113756	Ensembl Gene Model | MGI Sequence Detail	862	C57BL/6J
transcript	ENSMUST00000221733	Ensembl | MGI Sequence Detail	862	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;