Gm18021 Pseudogene Detail

Summary

• Symbol
  Gm18021
• Name
  predicted gene, 18021

• Feature Type
  pseudogene
• IDs
  MGI:5010206
  NCBI Gene: 100416292
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:74045815-74046619 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 42.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010206	pseudogene	Chr16:74045781-74046642 (+)
129S1/SvImJ	ENSMUSG00200008469	pseudogene	Chr16:70929284-70930145 (+)
A/J	ENSMUSG00195001617	pseudogene	Chr16:70699598-70700459 (+)
AKR/J	ENSMUSG00220005526	pseudogene	Chr16:70876036-70876897 (+)
BALB/cJ	ENSMUSG00180001652	pseudogene	Chr16:70780910-70781771 (+)
C3H/HeJ	ENSMUSG00175004602	pseudogene	Chr16:71054239-71055100 (+)
C57BL/6NJ	ENSMUSG00215014692	pseudogene	Chr16:70889741-70890602 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012677	pseudogene	Chr16:70826970-70827831 (+)
CBA/J	ENSMUSG00210015260	pseudogene	Chr16:71009255-71010116 (+)
DBA/2J	ENSMUSG00185004544	pseudogene	Chr16:70945748-70946609 (+)
FVB/NJ	ENSMUSG00205011831	pseudogene	Chr16:70711656-70712517 (+)
JF1/MsJ	ENSUMUG00000015462	pseudogene	Chr16:71145202-71146063 (+)
LP/J	ENSMUSG00230020923	pseudogene	Chr16:73503044-73503905 (+)
NOD/ShiLtJ	ENSMUSG00190017037	pseudogene	Chr16:70924833-70925694 (+)
NZO/HlLtJ	ENSMUSG00225029847	pseudogene	Chr16:76738506-76739367 (+)
PWK/PhJ	ENSLUMG00010011536	pseudogene	Chr16:70822762-70823623 (+)
SPRET/EiJ	ENSMSPG00010015180	pseudogene	Chr16:71611518-71612369 (+)
WSB/EiJ	ENSIUOG00005002408	pseudogene	Chr16:70950599-70951460 (+)

Homology

• Gene Tree
  Gm18021
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Genomic Mutations
  1 involving Gm18021
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116824 (Evidence)
• NCBI Gene
  100416292

Representative Sequences			Length	Strain/Species
genomic	100416292	NCBI Gene Model | MGI Sequence Detail	805	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76