Gm18016 Pseudogene Detail

Summary

• Symbol
  Gm18016
• Name
  predicted gene, 18016

• Feature Type
  pseudogene
• IDs
  MGI:5010201
  NCBI Gene: 100416275
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:86055984-86056825 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 46.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010201	pseudogene	Chr9:86055978-86058068 (-)
129S1/SvImJ	ENSMUSG00200006015	pseudogene	Chr9:83158237-83160431 (-)
A/J	ENSMUSG00195007736	pseudogene	Chr9:82953369-82955481 (-)
AKR/J	ENSMUSG00220020693	pseudogene	Chr9:83092374-83094502 (-)
BALB/cJ	ENSMUSG00180007677	pseudogene	Chr9:83058285-83060397 (-)
C3H/HeJ	ENSMUSG00175005031	pseudogene	Chr9:83118343-83120455 (-)
C57BL/6NJ	ENSMUSG00215012679	pseudogene	Chr9:83062705-83064795 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004679	pseudogene	Chr9:82658657-82660854 (-)
CBA/J	ENSMUSG00210006041	pseudogene	Chr9:83181401-83183491 (-)
DBA/2J	ENSMUSG00185002223	pseudogene	Chr9:83191906-83193996 (-)
FVB/NJ	ENSMUSG00205005066	pseudogene	Chr9:83366177-83368371 (-)
JF1/MsJ	ENSUMUG00000033873	pseudogene	Chr9:83064049-83066453 (-)
LP/J	ENSMUSG00230009761	pseudogene	Chr9:83306873-83309067 (-)
NOD/ShiLtJ	ENSMUSG00190012076	pseudogene	Chr9:83262160-83264292 (-)
NZO/HlLtJ	ENSMUSG00225016752	pseudogene	Chr9:83492843-83494933 (-)
PWK/PhJ	ENSLUMG00010003140	pseudogene	Chr9:82995398-82997595 (-)
SPRET/EiJ	ENSMSPG00010002653	pseudogene	Chr9:84456162-84458248 (-)
WSB/EiJ	ENSIUOG00005003848	pseudogene	Chr9:82669667-82671861 (-)

Homology

• Gene Tree
  Gm18016
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18016
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000111418 (Evidence)
• NCBI Gene
  100416275

Representative Sequences			Length	Strain/Species
genomic	100416275	NCBI Gene Model | MGI Sequence Detail	842	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;