Gm17995 Pseudogene Detail

Summary

• Symbol
  Gm17995
• Name
  predicted gene, 17995

• Feature Type
  pseudogene
• IDs
  MGI:5010180
  NCBI Gene: 100416240
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:89447707-89448236 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 43.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010180	pseudogene	Chr8:89447704-89448277 (-)
129S1/SvImJ	ENSMUSG00200017345	pseudogene	Chr8:83803372-83803904 (-)
A/J	ENSMUSG00195028384	pseudogene	Chr8:84174788-84175317 (-)
AKR/J	ENSMUSG00220042113	pseudogene	Chr8:84202404-84202936 (-)
BALB/cJ	ENSMUSG00180027452	pseudogene	Chr8:84006964-84007496 (-)
C3H/HeJ	ENSMUSG00175027053	pseudogene	Chr8:84113622-84114151 (-)
C57BL/6NJ	ENSMUSG00215032356	pseudogene	Chr8:83715044-83715573 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017686	pseudogene	Chr8:83576021-83576559 (-)
CBA/J	ENSMUSG00210040870	pseudogene	Chr8:84078267-84078799 (-)
DBA/2J	ENSMUSG00185038414	pseudogene	Chr8:90186863-90187395 (-)
FVB/NJ	ENSMUSG00205019602	pseudogene	Chr8:83134089-83134621 (-)
JF1/MsJ	ENSUMUG00000046307	pseudogene	Chr8:92509043-92509572 (-)
LP/J	ENSMUSG00230031357	pseudogene	Chr8:93800109-93800641 (-)
NOD/ShiLtJ	ENSMUSG00190016692	pseudogene	Chr8:84167582-84168114 (-)
NZO/HlLtJ	ENSMUSG00225040962	pseudogene	Chr8:97204187-97204719 (-)
PWK/PhJ	ENSLUMG00010042990	pseudogene	Chr8:83819437-83819968 (-)
SPRET/EiJ	ENSMSPG00010029249	pseudogene	Chr8:85759016-85759557 (-)
WSB/EiJ	ENSIUOG00005021139	pseudogene	Chr8:84898889-84899421 (-)

Homology

• Gene Tree
  Gm17995
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000109970 (Evidence)
• NCBI Gene
  100416240

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109970	Ensembl Gene Model | MGI Sequence Detail	530	C57BL/6J
transcript	ENSMUST00000209266	Ensembl | MGI Sequence Detail	530	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;