Gm17982 Pseudogene Detail

Summary

• Symbol
  Gm17982
• Name
  predicted gene, 17982

• Feature Type
  pseudogene
• IDs
  MGI:5010167
  NCBI Gene: 100416226
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:24026403-24027321 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 10.27 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010167	pseudogene	Chr7:24026192-24027321 (-)
129S1/SvImJ	ENSMUSG00200045881	pseudogene	Chr7:14027983-14029008 (-)
A/J	ENSMUSG00195054017	pseudogene	Chr7:16458191-16459217 (-)
AKR/J	ENSMUSG00220053766	pseudogene	Chr7:27923781-27924807 (+)
BALB/cJ	ENSMUSG00180054235	pseudogene	Chr7:14530193-14531219 (-)
C3H/HeJ	ENSMUSG00175052411	pseudogene	Chr7:15586605-15587630 (-)
C57BL/6NJ	ENSMUSG00215054918	pseudogene	Chr7:13941759-13942785 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052723	pseudogene	Chr7:15628046-15629073 (-)
CBA/J	ENSMUSG00210053698	pseudogene	Chr7:14772378-14773403 (-)
DBA/2J	ENSMUSG00185055010	pseudogene	Chr7:17980566-17981594 (-)
FVB/NJ	ENSMUSG00205052223	pseudogene	Chr7:14778237-14779263 (-)
JF1/MsJ	ENSUMUG00000057602	pseudogene	Chr7:22282489-22283514 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190052415	pseudogene	Chr7:14254074-14255099 (-)
NZO/HlLtJ	ENSMUSG00225027705	pseudogene	Chr7:21922412-21923440 (-)
PWK/PhJ	ENSLUMG00010051827	pseudogene	Chr7:14215362-14216383 (-)
SPRET/EiJ	ENSMSPG00010051555	pseudogene	Chr7:13878246-13879275 (-)
WSB/EiJ	ENSIUOG00005052807	pseudogene	Chr7:8706983-8708011 (-)

Homology

• Gene Tree
  Gm17982
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000118562 (Evidence)
• NCBI Gene
  100416226

Representative Sequences			Length	Strain/Species
genomic	100416226	NCBI Gene Model | MGI Sequence Detail	919	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;