Gm17979 Pseudogene Detail

Summary

• Symbol
  Gm17979
• Name
  predicted gene, 17979

• Feature Type
  pseudogene
• IDs
  MGI:5010164
  NCBI Gene: 100416223
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:133548588-133549122 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 73.32 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010164	pseudogene	Chr5:133548588-133549561 (+)
129S1/SvImJ	ENSMUSG00200048849	pseudogene	Chr5:127329268-127330233 (+)
A/J	ENSMUSG00195050581	pseudogene	Chr5:126832854-126833819 (+)
AKR/J	ENSMUSG00220049917	pseudogene	Chr5:126312474-126313439 (+)
BALB/cJ	ENSMUSG00180046483	pseudogene	Chr5:126939999-126940966 (+)
C3H/HeJ	ENSMUSG00175042002	pseudogene	Chr5:128866675-128867640 (+)
C57BL/6NJ	ENSMUSG00215048907	pseudogene	Chr5:126984165-126985130 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011752	pseudogene	Chr5:126319379-126320788 (+)
CAST/EiJ	ENSTCUG00005010514	pseudogene	Chr5:126182306-126183284 (+)
CBA/J	ENSMUSG00210007973	pseudogene	Chr5:127684393-127685358 (+)
DBA/2J	ENSMUSG00185007759	pseudogene	Chr5:130699494-130700459 (+)
FVB/NJ	ENSMUSG00205049375	pseudogene	Chr5:126586733-126587698 (+)
JF1/MsJ	ENSUMUG00000054518	pseudogene	Chr5:133580979-133581967 (+)
LP/J	ENSMUSG00230049107	pseudogene	Chr5:134814398-134815363 (+)
NOD/ShiLtJ	ENSMUSG00190046135	pseudogene	Chr5:126641205-126642168 (+)
NZO/HlLtJ	ENSMUSG00225023709	pseudogene	Chr5:142494981-142495952 (+)
PWK/PhJ	ENSLUMG00010018242	pseudogene	Chr5:125438621-125439612 (+)
SPRET/EiJ	ENSMSPG00010035377	pseudogene	Chr5:128859055-128860050 (+)
WSB/EiJ	ENSIUOG00005037054	pseudogene	Chr5:129272196-129273171 (+)

Homology

• Gene Tree
  Gm17979
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000106172 (Evidence)
• NCBI Gene
  100416223

Representative Sequences			Length	Strain/Species
genomic	100416223	NCBI Gene Model | MGI Sequence Detail	535	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;