Gm17973 Pseudogene Detail

Summary

• Symbol
  Gm17973
• Name
  predicted gene, 17973

• Feature Type
  pseudogene
• IDs
  MGI:5010158
  NCBI Gene: 100416216
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:119914527-119915044 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 52.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010158	pseudogene	Chr1:119914525-119915044 (+)
129S1/SvImJ	ENSMUSG00200001835	pseudogene	Chr1:117391301-117391820 (+)
A/J	ENSMUSG00195004568	pseudogene	Chr1:116632101-116632620 (+)
AKR/J	ENSMUSG00220025459	pseudogene	Chr1:116447833-116448352 (+)
BALB/cJ	ENSMUSG00180012615	pseudogene	Chr1:117041684-117042203 (+)
C3H/HeJ	ENSMUSG00175020147	pseudogene	Chr1:116862931-116863450 (+)
C57BL/6NJ	ENSMUSG00215012646	pseudogene	Chr1:116821710-116822229 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009249	pseudogene	Chr1:112015187-112015703 (+)
CAST/EiJ	ENSTCUG00005006612	pseudogene	Chr1:115796278-115796797 (+)
CBA/J	ENSMUSG00210001279	pseudogene	Chr1:116692592-116693111 (+)
DBA/2J	ENSMUSG00185013765	pseudogene	Chr1:121140915-121141434 (+)
FVB/NJ	ENSMUSG00205012417	pseudogene	Chr1:116194929-116195448 (+)
JF1/MsJ	ENSUMUG00000030577	pseudogene	Chr1:120234005-120234524 (+)
LP/J	ENSMUSG00230009297	pseudogene	Chr1:120569104-120569623 (+)
NOD/ShiLtJ	ENSMUSG00190006517	pseudogene	Chr1:116677799-116678318 (+)
NZO/HlLtJ	ENSMUSG00225005207	pseudogene	Chr1:124363549-124364068 (+)
PWK/PhJ	ENSLUMG00010014917	pseudogene	Chr1:115819888-115820407 (+)
SPRET/EiJ	ENSMSPG00010017358	pseudogene	Chr1:118451106-118451621 (+)
WSB/EiJ	ENSIUOG00005003128	pseudogene	Chr1:116544235-116544754 (+)

Homology

• Gene Tree
  Gm17973
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm17973
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000092245 (Evidence)
• NCBI Gene
  100416216

Representative Sequences			Length	Strain/Species
genomic	100416216	NCBI Gene Model | MGI Sequence Detail	518	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45