Gm17956 Pseudogene Detail

Summary

• Symbol
  Gm17956
• Name
  predicted gene, 17956

• Feature Type
  pseudogene
• IDs
  MGI:5010141
  NCBI Gene: 100416171
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:104036763-104037569 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 45.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010141	pseudogene	Chr3:104036740-104037577 (+)
129S1/SvImJ	ENSMUSG00200045242	pseudogene	Chr3:100649339-100650176 (+)
A/J	ENSMUSG00195048648	pseudogene	Chr3:101062929-101063766 (+)
AKR/J	ENSMUSG00220043184	pseudogene	Chr3:99422957-99423794 (+)
BALB/cJ	ENSMUSG00180041937	pseudogene	Chr3:100991019-100991856 (+)
C3H/HeJ	ENSMUSG00175031443	pseudogene	Chr3:100545232-100546069 (+)
C57BL/6NJ	ENSMUSG00215036441	pseudogene	Chr3:101306840-101307677 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011000	pseudogene	Chr3:98209502-98210317 (+)
CAST/EiJ	ENSTCUG00005021422	pseudogene	Chr3:101269394-101270231 (+)
CBA/J	ENSMUSG00210051584	pseudogene	Chr3:101167271-101168108 (+)
DBA/2J	ENSMUSG00185022586	pseudogene	Chr3:101643015-101643852 (+)
FVB/NJ	ENSMUSG00205034503	pseudogene	Chr3:100230422-100231259 (+)
JF1/MsJ	ENSUMUG00000051589	pseudogene	Chr3:100395713-100396558 (+)
LP/J	ENSMUSG00230020886	pseudogene	Chr3:103577653-103578490 (+)
NOD/ShiLtJ	ENSMUSG00190048824	pseudogene	Chr3:101842999-101843836 (+)
NZO/HlLtJ	ENSMUSG00225020505	pseudogene	Chr3:106044741-106045578 (+)
PWK/PhJ	ENSLUMG00010014002	pseudogene	Chr8:59807489-59808334 (+)
PWK/PhJ	ENSLUMG00010030766	pseudogene	Chr3:100472031-100472868 (+)
SPRET/EiJ	ENSMSPG00010047478	pseudogene	Chr3:100673860-100674687 (+)
WSB/EiJ	ENSIUOG00005034093	pseudogene	Chr3:101188121-101188958 (+)

Homology

• Gene Tree
  Gm17956
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17956
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000105793 (Evidence)
• NCBI Gene
  100416171

Representative Sequences			Length	Strain/Species
genomic	100416171	NCBI Gene Model | MGI Sequence Detail	807	C57BL/6J

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426