Gm17834 Pseudogene Detail

Summary

• Symbol
  Gm17834
• Name
  predicted gene, 17834

• Feature Type
  pseudogene
• IDs
  MGI:5010019
  NCBI Gene: 100415951
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:48795958-48796536 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 23.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  16 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010019	pseudogene	Chr6:48795958-48797401 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013442	pseudogene	Chr6:47787086-47789082 (+)
A/J	MGP_AJ_G0013426	pseudogene	Chr6:45609118-45610556 (+)
AKR/J	MGP_AKRJ_G0013390	pseudogene	Chr6:47219896-47221327 (+)
BALB/cJ	MGP_BALBcJ_G0013404	pseudogene	Chr6:45943187-45944580 (+)
C3H/HeJ	MGP_C3HHeJ_G0013254	pseudogene	Chr6:47222147-47225023 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013788	pseudogene	Chr6:48911627-48914630 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011878	pseudogene	Chr6:43231557-43232765 (+)
CAST/EiJ	MGP_CASTEiJ_G0012961	pseudogene	Chr6:46940598-46943234 (+)
CBA/J	MGP_CBAJ_G0013223	pseudogene	Chr6:50927071-50928443 (+)
DBA/2J	MGP_DBA2J_G0013307	pseudogene	Chr6:45525753-45527923 (+)
FVB/NJ	MGP_FVBNJ_G0013303	pseudogene	Chr6:45159299-45160734 (+)
LP/J	MGP_LPJ_G0013376	pseudogene	Chr6:47773619-47774974 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013321	pseudogene	Chr6:53734765-53736202 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013783	pseudogene	Chr6:47079666-47081165 (+)
PWK/PhJ	MGP_PWKPhJ_G0012773	pseudogene	Chr6:45054229-45055637 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012554	pseudogene	Chr6:46434707-46435912 (+)
WSB/EiJ	MGP_WSBEiJ_G0013004	pseudogene	Chr6:47079789-47081882 (+)

Homology

• Gene Tree
  Gm17834
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107574 (Evidence)
• NCBI Gene
  100415951

Representative Sequences			Length	Strain/Species
genomic	100415951	NCBI Gene Model | MGI Sequence Detail	579	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;