Gm17832 Pseudogene Detail

Summary

• Symbol
  Gm17832
• Name
  predicted gene, 17832

• Feature Type
  pseudogene
• IDs
  MGI:5010017
  NCBI Gene: 100415946
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:102056919-102057743 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 54.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010017	pseudogene	Chr13:102056919-102058899 (+)
129S1/SvImJ	ENSMUSG00200009304	pseudogene	Chr13:96503488-96505459 (+)
A/J	ENSMUSG00195030244	pseudogene	Chr13:97085141-97087112 (+)
AKR/J	ENSMUSG00220027744	pseudogene	Chr13:95533942-95535913 (+)
BALB/cJ	ENSMUSG00180038146	pseudogene	Chr13:97651340-97653311 (+)
C3H/HeJ	ENSMUSG00175018390	pseudogene	Chr13:97751237-97753208 (+)
C57BL/6NJ	ENSMUSG00215031793	pseudogene	Chr13:97701354-97703325 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011694	pseudogene	Chr13:96873045-96875012 (+)
CBA/J	ENSMUSG00210011870	pseudogene	Chr13:97074898-97076869 (+)
DBA/2J	ENSMUSG00185027125	pseudogene	Chr13:100817373-100819344 (+)
FVB/NJ	ENSMUSG00205035405	pseudogene	Chr13:96498225-96500196 (+)
JF1/MsJ	ENSUMUG00000033309	pseudogene	Chr13:100422603-100424575 (+)
LP/J	ENSMUSG00230008496	pseudogene	Chr13:110973347-110975318 (+)
NOD/ShiLtJ	ENSMUSG00190044382	pseudogene	Chr13:97389825-97391796 (+)
NZO/HlLtJ	ENSMUSG00225037636	pseudogene	Chr13:103331880-103333851 (+)
PWK/PhJ	ENSLUMG00010026857	pseudogene	Chr13:96480219-96482191 (+)
SPRET/EiJ	ENSMSPG00010009639	pseudogene	Chr13:97842925-97844885 (+)
WSB/EiJ	ENSIUOG00005035380	pseudogene	Chr13:96472060-96474031 (+)

Homology

• Gene Tree
  Gm17832
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114717 (Evidence)
• NCBI Gene
  100415946

Representative Sequences			Length	Strain/Species
genomic	100415946	NCBI Gene Model | MGI Sequence Detail	825	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:238766 Shanghai Model Organisms Center, Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China. MGI Direct Data Submission. 2017;