Gm17830 Gene Detail

Summary

• Symbol
  Gm17830
• Name
  predicted gene, 17830

• Feature Type
  lncRNA gene
• IDs
  MGI:5010015
  NCBI Gene: 100415784
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:49611507-49619988 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 25.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  401 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010015	lncRNA gene	Chr17:49547494-49619988 (-)
129S1/SvImJ	ENSMUSG00200029054	lncRNA gene	Chr17:44824049-44832529 (-)
A/J	ENSMUSG00195022534	lncRNA gene	Chr17:46309942-46317152 (-)
AKR/J	ENSMUSG00220038400	lncRNA gene	Chr17:45309979-45317187 (-)
BALB/cJ	ENSMUSG00180025492	lncRNA gene	Chr17:46066220-46073429 (-)
C3H/HeJ	ENSMUSG00175016273	lncRNA gene	Chr17:45373733-45380941 (-)
C57BL/6NJ	ENSMUSG00215037098	lncRNA gene	Chr17:44936365-44944846 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025365	lncRNA gene	Chr17:46113384-46121879 (-)
CBA/J	ENSMUSG00210037913	lncRNA gene	Chr17:45123278-45130486 (-)
DBA/2J	ENSMUSG00185029853	lncRNA gene	Chr17:48022355-48029563 (-)
FVB/NJ	ENSMUSG00205052819	lncRNA gene	Chr17:45591912-45600391 (-)
JF1/MsJ	ENSUMUG00000037844	lncRNA gene	Chr17:47709748-47718145 (-)
LP/J	ENSMUSG00230042024	lncRNA gene	Chr17:48935595-48944075 (-)
NOD/ShiLtJ	ENSMUSG00190018502	lncRNA gene	Chr17:45096058-45104541 (-)
NZO/HlLtJ	ENSMUSG00225044094	lncRNA gene	Chr17:51174868-51182078 (-)
PWK/PhJ	ENSLUMG00010036194	lncRNA gene	Chr17:44945891-44954276 (-)
SPRET/EiJ	ENSMSPG00010037943	lncRNA gene	Chr17:45155983-45163636 (-)
WSB/EiJ	ENSIUOG00005027814	lncRNA gene	Chr17:45978041-45985251 (-)

Homology

• Gene Tree
  Gm17830
  

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  43
• RefSeq
  1

• Ensembl
  ENSMUSG00000117221 (Evidence)
• NCBI Gene
  100415784

Representative Sequences			Length	Strain/Species
genomic	100415784	NCBI Gene Model | MGI Sequence Detail	8482	C57BL/6J
transcript	NR_033486	RefSeq | MGI Sequence Detail	1829	ZRU/MplStud

Molecular
Reagents

• All nucleic 6

  cDNA 6

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;