Gm17805 Pseudogene Detail

Summary

• Symbol
  Gm17805
• Name
  predicted gene, 17805

• Feature Type
  pseudogene
• IDs
  MGI:5009991
  NCBI Gene: 100286839
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:9850522-9851095 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 6.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009991	pseudogene	Chr14:9850435-9851149 (-)
129S1/SvImJ	ENSMUSG00200025620	pseudogene	Chr14:6530076-6530649 (-)
A/J	ENSMUSG00195030718	pseudogene	Chr14:7338552-7339125 (-)
AKR/J	ENSMUSG00220023741	pseudogene	Chr14:6497784-6498357 (-)
BALB/cJ	ENSMUSG00180026081	pseudogene	Chr14:6646615-6647188 (-)
C3H/HeJ	ENSMUSG00175009390	pseudogene	Chr14:6674313-6674886 (-)
C57BL/6NJ	ENSMUSG00215018728	pseudogene	Chr14:6893795-6894368 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031056	pseudogene	Chr14:6574560-6575133 (-)
CBA/J	ENSMUSG00210036043	pseudogene	Chr14:6896592-6897165 (-)
DBA/2J	ENSMUSG00185038392	pseudogene	Chr14:6902509-6903082 (-)
FVB/NJ	ENSMUSG00205027673	pseudogene	Chr14:6858273-6858846 (-)
JF1/MsJ	ENSUMUG00000028043	pseudogene	Chr14:6908048-6908621 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190035718	pseudogene	Chr14:6889878-6890451 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010034777	pseudogene	Chr14:28214803-28215376 (-)
SPRET/EiJ	ENSMSPG00010002466	pseudogene	Chr14:7215557-7216130 (-)
WSB/EiJ	ENSIUOG00005025417	pseudogene	Chr14:6731772-6732345 (-)

Homology

• Gene Tree
  Gm17805
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000114453 (Evidence)
• NCBI Gene
  100286839

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114453	Ensembl Gene Model | MGI Sequence Detail	574	C57BL/6J
transcript	ENSMUST00000225784	Ensembl | MGI Sequence Detail	574	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;