Gm17794 Pseudogene Detail

Summary

• Symbol
  Gm17794
• Name
  predicted gene, 17794

• Feature Type
  pseudogene
• IDs
  MGI:5009980
  NCBI Gene: 100126821
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:22667218-22668172 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 10.31 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  223 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009980	pseudogene	Chr10:22667212-22668375 (+)
129S1/SvImJ	ENSMUSG00200010448	pseudogene	Chr10:19501706-19502660 (+)
A/J	ENSMUSG00195007270	pseudogene	Chr10:19819561-19820515 (+)
AKR/J	ENSMUSG00220010421	pseudogene	Chr10:19517919-19518873 (+)
BALB/cJ	ENSMUSG00180015487	pseudogene	Chr10:19942840-19943794 (+)
C3H/HeJ	ENSMUSG00175021216	pseudogene	Chr10:19630585-19631539 (+)
C57BL/6NJ	ENSMUSG00215004011	pseudogene	Chr10:19450438-19451392 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030126	pseudogene	Chr10:19268253-19269207 (+)
CBA/J	ENSMUSG00210015597	pseudogene	Chr10:19564882-19565836 (+)
DBA/2J	ENSMUSG00185007321	pseudogene	Chr10:19740271-19741225 (+)
FVB/NJ	ENSMUSG00205019692	pseudogene	Chr10:19773855-19774809 (+)
JF1/MsJ	ENSUMUG00000014616	pseudogene	Chr10:19576240-19577194 (+)
LP/J	ENSMUSG00230011734	pseudogene	Chr10:21541943-21542897 (+)
NOD/ShiLtJ	ENSMUSG00190011510	pseudogene	Chr10:19874458-19875412 (+)
NZO/HlLtJ	ENSMUSG00225030652	pseudogene	Chr10:25799315-25800269 (+)
PWK/PhJ	ENSLUMG00010015606	pseudogene	Chr10:19478744-19479698 (+)
SPRET/EiJ	ENSMSPG00010015095	pseudogene	Chr10:20118907-20119860 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm17794
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17794
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000112727 (Evidence)
• NCBI Gene
  100126821

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112727	Ensembl Gene Model | MGI Sequence Detail	955	C57BL/6J
transcript	ENSMUST00000220252	Ensembl | MGI Sequence Detail	955	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87