Gm17775 Pseudogene Detail

Summary

• Symbol
  Gm17775
• Name
  predicted gene, 17775

• Feature Type
  pseudogene
• IDs
  MGI:5009939
  NCBI Gene: 100046591
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:113522881-113523138 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 49.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009939	pseudogene	Chr3:113522296-113523138 (+)
129S1/SvImJ	ENSMUSG00200035734	pseudogene	Chr3:110141423-110141680 (+)
A/J	ENSMUSG00195026579	pseudogene	Chr3:110453433-110453690 (+)
AKR/J	ENSMUSG00220033739	pseudogene	Chr3:108844208-108844465 (+)
BALB/cJ	ENSMUSG00180019087	pseudogene	Chr3:110398161-110398418 (+)
C3H/HeJ	ENSMUSG00175031165	pseudogene	Chr3:109938416-109938673 (+)
C57BL/6NJ	ENSMUSG00215035884	pseudogene	Chr3:110646781-110647038 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011025	pseudogene	Chr3:107583652-107583909 (+)
CAST/EiJ	ENSTCUG00005027234	pseudogene	Chr3:110929637-110929894 (+)
CBA/J	ENSMUSG00210008783	pseudogene	Chr3:110547736-110547993 (+)
DBA/2J	ENSMUSG00185023324	pseudogene	Chr3:111137663-111137920 (+)
FVB/NJ	ENSMUSG00205031996	pseudogene	Chr3:109593986-109594243 (+)
JF1/MsJ	ENSUMUG00000006119	pseudogene	Chr3:109951400-109951657 (+)
LP/J	ENSMUSG00230012317	pseudogene	Chr3:113036933-113037190 (+)
NOD/ShiLtJ	ENSMUSG00190040887	pseudogene	Chr3:111412331-111412588 (+)
NZO/HlLtJ	ENSMUSG00225003889	pseudogene	Chr3:115560157-115560414 (+)
PWK/PhJ	ENSLUMG00010024976	pseudogene	Chr3:109862639-109862896 (+)
SPRET/EiJ	ENSMSPG00010036755	pseudogene	Chr3:110478558-110478815 (+)
WSB/EiJ	ENSIUOG00005005215	pseudogene	Chr3:110577346-110577603 (+)

Homology

• Gene Tree
  Gm17775
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17775
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000106454 (Evidence)
• NCBI Gene
  100046591

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106454	Ensembl Gene Model | MGI Sequence Detail	258	C57BL/6J
transcript	ENSMUST00000198542	Ensembl | MGI Sequence Detail	258	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426