Ighv1-48 Pseudogene Detail

Summary

• Symbol
  Ighv1-48
• Name
  immunoglobulin heavy variable 1-48

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009916
  NCBI Gene: 780928
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:115001847-115002140 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.49 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009916	pseudogenic gene segment	Chr12:115001847-115002140 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220042406	pseudogenic gene segment	Chr12:107205215-107205508 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175045408	pseudogenic gene segment	Chr12:110996146-110996439 (-)
C57BL/6NJ	ENSMUSG00215049243	pseudogenic gene segment	Chr12:107869190-107869483 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000123	pseudogenic gene segment	Chr8:43488552-43488839 (-)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210031990	pseudogenic gene segment	Chr12:108272328-108272621 (-)
DBA/2J	ENSMUSG00185033182	pseudogenic gene segment	Chr12:110636443-110636704 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000031377	pseudogenic gene segment	Chr12:114740459-114740752 (-)
LP/J	ENSMUSG00230049217	pseudogenic gene segment	Chr12:117093141-117093434 (-)
NOD/ShiLtJ	ENSMUSG00190034409	pseudogenic gene segment	Chr12:106707532-106707825 (-)
NZO/HlLtJ	ENSMUSG00225043525	pseudogenic gene segment	Chr12:119007734-119008027 (-)
PWK/PhJ	ENSLUMG00010052022	pseudogenic gene segment	Chr12:108494778-108495070 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Ighv1-48
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000102453 (Evidence)
• NCBI Gene
  780928

Representative Sequences			Length	Strain/Species
genomic	780928	NCBI Gene Model | MGI Sequence Detail	294	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;