Ighv1-6 Pseudogene Detail

Summary

• Symbol
  Ighv1-6
• Name
  immunoglobulin heavy variable 1-6

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009904
  NCBI Gene: 780861
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:114496592-114496884 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  289 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009904	pseudogenic gene segment	Chr12:114496592-114496884 (-)
129S1/SvImJ	ENSMUSG00200030396	pseudogenic gene segment	Chr12:106199535-106199827 (-)
A/J	ENSMUSG00195048932	pseudogenic gene segment	Chr12:108936737-108937029 (-)
AKR/J	ENSMUSG00220042374	pseudogenic gene segment	Chr12:106679449-106679741 (-)
BALB/cJ	ENSMUSG00180052776	pseudogenic gene segment	Chr12:108431639-108431931 (-)
C3H/HeJ	ENSMUSG00175048258	pseudogenic gene segment	Chr12:110664359-110664651 (-)
C57BL/6NJ	ENSMUSG00215048525	pseudogenic gene segment	Chr12:107286425-107286717 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042856	pseudogenic gene segment	Chr12:107781194-107781486 (-)
CBA/J	ENSMUSG00210040185	pseudogenic gene segment	Chr12:107740854-107741146 (-)
DBA/2J	ENSMUSG00185035802	pseudogenic gene segment	Chr12:109649789-109650081 (-)
DBA/2J	ENSMUSG00185036236	pseudogenic gene segment	Chr12:109599260-109599552 (-)
FVB/NJ	ENSMUSG00205042239	pseudogenic gene segment	Chr12:106707454-106707746 (-)
JF1/MsJ	ENSUMUG00000029271	pseudogenic gene segment	Chr12:114283148-114283440 (-)
LP/J	ENSMUSG00230048340	pseudogenic gene segment	Chr12:116549117-116549409 (-)
NOD/ShiLtJ	ENSMUSG00190029200	pseudogenic gene segment	Chr12:106132244-106132536 (-)
NZO/HlLtJ	ENSMUSG00225043649	pseudogenic gene segment	Chr12:118482047-118482339 (-)
PWK/PhJ	ENSLUMG00010049167	pseudogenic gene segment	Chr12:107996704-107996996 (-)
SPRET/EiJ	ENSMSPG00010022886	pseudogenic gene segment	Chr12:110635945-110636237 (-)
WSB/EiJ	ENSIUOG00005043092	pseudogenic gene segment	Chr12:107075782-107076074 (-)
WSB/EiJ	ENSIUOG00005040997	pseudogenic gene segment	Chr12:107126340-107126632 (-)

Homology

• Gene Tree
  Ighv1-6
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000103915 (Evidence)
• NCBI Gene
  780861

Representative Sequences			Length	Strain/Species
genomic	780861	NCBI Gene Model | MGI Sequence Detail	293	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;