Ighv1-1 Pseudogene Detail

Summary

• Symbol
  Ighv1-1
• Name
  immunoglobulin heavy variable 1-1

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009901
  NCBI Gene: 780834
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:114315325-114315615 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  218 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009901	pseudogenic gene segment	Chr12:114315325-114315615 (-)
129S1/SvImJ	ENSMUSG00200028449	pseudogenic gene segment	Chr12:106052203-106052493 (-)
A/J	ENSMUSG00195048979	pseudogenic gene segment	Chr12:108806423-108806713 (-)
AKR/J	ENSMUSG00220042695	pseudogenic gene segment	Chr12:106435395-106435685 (-)
BALB/cJ	ENSMUSG00180052126	pseudogenic gene segment	Chr12:108284305-108284595 (-)
C3H/HeJ	ENSMUSG00175047567	pseudogenic gene segment	Chr12:110425206-110425496 (-)
C57BL/6NJ	ENSMUSG00215048841	pseudogenic gene segment	Chr12:107105123-107105413 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000104	pseudogenic gene segment	Chr12:108893484-108893746 (-)
CAST/EiJ	ENSTCUG00005042331	pseudogenic gene segment	Chr12:107305418-107305727 (-)
CBA/J	ENSMUSG00210036600	pseudogenic gene segment	Chr12:107501700-107501990 (-)
DBA/2J	ENSMUSG00185032434	pseudogenic gene segment	Chr12:109467519-109467809 (-)
FVB/NJ	ENSMUSG00205045276	pseudogenic gene segment	Chr12:106559910-106560200 (-)
JF1/MsJ	ENSUMUG00000027167	pseudogenic gene segment	Chr12:114101834-114102124 (-)
LP/J	ENSMUSG00230047903	pseudogenic gene segment	Chr12:116367818-116368108 (-)
NOD/ShiLtJ	ENSMUSG00190033224	pseudogenic gene segment	Chr12:105950938-105951228 (-)
NZO/HlLtJ	ENSMUSG00225043431	pseudogenic gene segment	Chr12:118242886-118243176 (-)
PWK/PhJ	ENSLUMG00010050038	pseudogenic gene segment	Chr12:107791215-107791505 (-)
SPRET/EiJ	ENSMSPG00010024814	pseudogenic gene segment	Chr12:110505427-110505723 (-)
WSB/EiJ	ENSIUOG00005042920	pseudogenic gene segment	Chr12:106943429-106943719 (-)

Homology

• Gene Tree
  Ighv1-1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000103340 (Evidence)
• NCBI Gene
  780834

Representative Sequences			Length	Strain/Species
genomic	780834	NCBI Gene Model | MGI Sequence Detail	291	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;