Ighv5-18 Pseudogene Detail

Summary

• Symbol
  Ighv5-18
• Name
  immunoglobulin heavy variable 5-18

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009892
  NCBI Gene: 780796
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:113839416-113839859 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009892	pseudogenic gene segment	Chr12:113839392-113839859 (-)
129S1/SvImJ	ENSMUSG00200030978	pseudogenic gene segment	Chr12:105574046-105574490 (-)
A/J	ENSMUSG00195046569	pseudogenic gene segment	Chr12:108307573-108308012 (-)
AKR/J	ENSMUSG00220041329	pseudogenic gene segment	Chr12:106062509-106062952 (-)
BALB/cJ	ENSMUSG00180051682	pseudogenic gene segment	Chr12:107762144-107762588 (-)
C3H/HeJ	ENSMUSG00175049373	pseudogenic gene segment	Chr12:110034993-110035436 (-)
C57BL/6NJ	ENSMUSG00215048389	pseudogenic gene segment	Chr12:106628694-106629137 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000099	pseudogenic gene segment	Chr12:108406257-108406700 (-)
CAST/EiJ	ENSTCUG00005041987	pseudogenic gene segment	Chr12:106252337-106252780 (-)
CBA/J	ENSMUSG00210031554	pseudogenic gene segment	Chr12:107128761-107129204 (-)
DBA/2J	ENSMUSG00185031364	pseudogenic gene segment	Chr12:108731642-108732085 (-)
FVB/NJ	ENSMUSG00205044838	pseudogenic gene segment	Chr12:106085886-106086330 (-)
JF1/MsJ	ENSUMUG00000033123	pseudogenic gene segment	Chr12:113634847-113635290 (-)
LP/J	ENSMUSG00230047347	pseudogenic gene segment	Chr12:115891656-115892099 (-)
NOD/ShiLtJ	ENSMUSG00190027710	pseudogenic gene segment	Chr12:105474762-105475205 (-)
NZO/HlLtJ	ENSMUSG00225044789	pseudogenic gene segment	Chr12:117870008-117870451 (-)
PWK/PhJ	ENSLUMG00010046506	pseudogenic gene segment	Chr12:107293972-107294415 (-)
SPRET/EiJ	ENSMSPG00010025747	pseudogenic gene segment	Chr12:109263699-109264142 (-)
WSB/EiJ	ENSIUOG00005041490	pseudogenic gene segment	Chr12:106262217-106262660 (-)

Homology

• Gene Tree
  Ighv5-18
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000103893 (Evidence)
• NCBI Gene
  780796

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103893	Ensembl Gene Model | MGI Sequence Detail	444	C57BL/6J
transcript	ENSMUST00000193834	Ensembl | MGI Sequence Detail	326	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;