Ighv5-11 Pseudogene Detail

Summary

• Symbol
  Ighv5-11
• Name
  immunoglobulin heavy variable 5-11

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009891
  NCBI Gene: 777784
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:113650849-113651125 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009891	pseudogenic gene segment	Chr12:113650846-113651341 (-)
129S1/SvImJ	ENSMUSG00200028797	pseudogenic gene segment	Chr12:105454208-105454703 (-)
A/J	ENSMUSG00195048461	pseudogenic gene segment	Chr12:107959359-107959865 (-)
AKR/J	ENSMUSG00220040331	pseudogenic gene segment	Chr12:105870410-105870906 (-)
BALB/cJ	ENSMUSG00180053467	pseudogenic gene segment	Chr12:107458249-107458744 (-)
BALB/cJ	ENSMUSG00180053389	pseudogenic gene segment	Chr12:107258432-107258927 (-)
BALB/cJ	ENSMUSG00180051810	pseudogenic gene segment	Chr12:107222830-107223325 (-)
C3H/HeJ	ENSMUSG00175047021	pseudogenic gene segment	Chr12:109808608-109808819 (-)
C57BL/6NJ	ENSMUSG00215049068	pseudogenic gene segment	Chr12:106440006-106440501 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043915	pseudogenic gene segment	Chr12:106063416-106063924 (-)
CBA/J	ENSMUSG00210034507	pseudogenic gene segment	Chr12:106904309-106904520 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000024332	pseudogenic gene segment	Chr12:113380305-113380370 (-)
LP/J	ENSMUSG00230048238	pseudogenic gene segment	Chr12:115702982-115703477 (-)
NOD/ShiLtJ	ENSMUSG00190028187	pseudogenic gene segment	Chr12:105286078-105286573 (-)
NZO/HlLtJ	ENSMUSG00225044287	pseudogenic gene segment	Chr12:117599020-117599515 (-)
PWK/PhJ	ENSLUMG00010050393	pseudogenic gene segment	Chr12:106981679-106982191 (-)
SPRET/EiJ	ENSMSPG00010020055	pseudogenic gene segment	Chr12:109146649-109147599 (-)
WSB/EiJ	ENSIUOG00005042061	pseudogenic gene segment	Chr12:106135676-106135930 (-)

Homology

• Gene Tree
  Ighv5-11
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000103185 (Evidence)
• NCBI Gene
  777784

Representative Sequences			Length	Strain/Species
genomic	777784	NCBI Gene Model | MGI Sequence Detail	277	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;